Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02106 ATGGCTAAAAATGGGCGTGCACCCTCCATGTCCTTTGTATCAAAGAATAACTCCTTGGAAGGTCTCTCCACTCTCTCTAATAGCTCCCCTATCAAGGGTGGTGCAAGCGGAGGAAACACAATCTCCCTTTCCAACAACAACAATTATGGAGAGTGCTACATCCTCCCTCGTGAAACCAAGGAGAAGAAGGACATAACTACACCTTCCAACTCCAAGGGACGAAGAGGGAGGCCATCTGGCTCTAAGAACAAGCCTAAGCCCCCCATTATAATCAAGGAGGATAGCAATCAATATCTCGAACCAATCGTTATTGAAATCCCTACTGGGAACGAGGTTGTTAAGGCCATCATTGAGGTCGCTTATCGTCATCATGACGACATCACTGTGCTAAGGGGTTCGGGTTATGTTTTCGACATTACCCTTTGCCACCCTCAATCGCACACTGCTCGTACTTTCTCTATCAACGGACATTTGAGAATAATATCTCTTACAGGAACATACATGAGTGGTCCTATTCCCCCAGTCTCTCCTTCCAATCGTGCTTTCTCCTCCGTTATTCATCGCTCAAGGCCCCTATACCAGGTACTTTGTGGAGTTGCTGGAGGGAAGCTTGTGTGTGCAAGTCGTATGCTTATTGTGGCTTCAATGTTCAAGAAGCTTGAGTACCACAACTTGCCCTTCATCAATGGAAGTGTAGAGGAAGTTGAAATGGGTGACCACAAATATAATGGTGTTAATAATGTTGATGTAAGTGGTCCTCGTGGAATCACCAACAACATTGTCATTGTTATTCCCAATGATATGTCTGCTTTCAGTAAGAAGAGAGAATATGAAACCAAGGAGAAGAAGGATGCAACCACATCGTTTAACTCTAAGGAACCAAAGGAAAGGCCATTTGGCCCTAAGAACAAGCCTAAGCCACCCATCCTAATTAAGGAAGATAACAATCAATATCTCAAACTTATCATTATTGAAATCCTTCGCTGGAAATGA 993 0.4391 MAKNGRAPSMSFVSKNNSLEGLSTLSNSSPIKGGASGGNTISLSNNNNYGECYILPRETKEKKDITTPSNSKGRRGRPSGSKNKPKPPIIIKEDSNQYLEPIVIEIPTGNEVVKAIIEVAYRHHDDITVLRGSGYVFDITLCHPQSHTARTFSINGHLRIISLTGTYMSGPIPPVSPSNRAFSSVIHRSRPLYQVLCGVAGGKLVCASRMLIVASMFKKLEYHNLPFINGSVEEVEMGDHKYNGVNNVDVSGPRGITNNIVIVIPNDMSAFSKKREYETKEKKDATTSFNSKEPKERPFGPKNKPKPPILIKEDNNQYLKLIIIEILRWK. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02106 330 Gene3D - 99 253 - -
Seca7g02106 330 MobiDBLite consensus disorder prediction 59 91 - -
Seca7g02106 330 MobiDBLite consensus disorder prediction 275 309 - -
Seca7g02106 330 CDD DUF296 101 174 IPR005175 -
Seca7g02106 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 217 IPR005175 -
Seca7g02106 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 278 326 IPR014476 GO:0003680
Seca7g02106 330 MobiDBLite consensus disorder prediction 275 302 - -
Seca7g02106 330 ProSiteProfiles PPC domain profile profile. 95 238 IPR005175 -
Seca7g02106 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02106 Seca-Chr7 48351791 48353317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02106 75 226 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.897 2.56e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02106 - - lang:109356348 135.191