Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02102 TCAGAGAGTTCCACATATGTTGAGCCTGAGGTTAGAAGACCTGGTTCTGAATTGAATTCTCAGGATGTCTCAGACAATGGCAGCTCAGAATCCCTCAGGAGGAATTCAATTCCTAATTTGTCCCAGAGACCTAGCAACCTTAGAGTGTTTGCTGTATTTGAACTGAAATATGCCACAAAGAATTTCAACCATTCTGTTATGATTGAAGAGGGTGGGTTTGGGTGTGTCTACCTGGGATTAATAAGAAGTGTAGAGGACCCTTCCAGAAGAATTGAAGTTGCAGTTAAACAACTTAGTAAAAGAGGAATGCAGGGTCTTAAGGAATGGGTGACAGAAGTGAATGTTTTGGGCATTGTTGAGCATCTCAATCTTGTGAAACTAGTTGGCTACTGTGATGATGATGATGAAAGGGGAATCCAACGCCTTCTGATTTATGAATACATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGATCAGGGACTCCTCTCCCATGGAGTAGGAGATTAAAAATAGCCCAAGATGCAGCTTGTGGATTAACATACCTGCATGAGGAAATGGATTTTCAGGTATAG 579 0.418 SESSTYVEPEVRRPGSELNSQDVSDNGSSESLRRNSIPNLSQRPSNLRVFAVFELKYATKNFNHSVMIEEGGFGCVYLGLIRSVEDPSRRIEVAVKQLSKRGMQGLKEWVTEVNVLGIVEHLNLVKLVGYCDDDDERGIQRLLIYEYMPNRSVEHHLSHRSGTPLPWSRRLKIAQDAACGLTYLHEEMDFQV. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02102 192 Gene3D Phosphorylase Kinase; domain 1 42 147 - -
Seca7g02102 192 Pfam Protein tyrosine and serine/threonine kinase 67 187 IPR001245 GO:0004672|GO:0006468
Seca7g02102 192 MobiDBLite consensus disorder prediction 1 39 - -
Seca7g02102 192 PANTHER OS01G0588500 PROTEIN-RELATED 32 187 - -
Seca7g02102 192 FunFam Serine/threonine-protein kinase BIK1 29 147 - -
Seca7g02102 192 ProSiteProfiles Protein kinase domain profile. 62 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02102 192 MobiDBLite consensus disorder prediction 17 39 - -
Seca7g02102 192 Gene3D Transferase(Phosphotransferase) domain 1 149 191 - -
Seca7g02102 192 SUPERFAMILY Protein kinase-like (PK-like) 37 186 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02102 Seca-Chr7 47929184 47931362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02102 48 189 Glycoside Hydrolase AT3G07070 45.139 1.78e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca7g02102 PK_Tyr_Ser-Thr 9.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02102 - - gmx:100813060 331.643