Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02101 ATGATTCATTCTCTAATGGTTTCCAAATCCATTCAAGTCCTCTTTTTTCTTTGTACTCTTGCTTTTCTTTCAGAAGTTGCTTTTTCTGACCCTCCATATGAAATATGTTCCACAAGCAGCAGCTATGCAAATGGAAGTTCCTTTCAAAGAAATCTAAGGAGCCTCCTCCTCTCTTTGCCCTCCAATGCTTCAATCTCCAAATCCTATAATACTTCTTCCGGATTTGCCCCTGATGGAGTTTATGTCCTCTACATGTGTCTTAACTATGTTTCAAATGAAACTTGCCACAAATGCATAACAACTGCAATAGGAGACATTGTCAAACTCTGTCCTCAATCAAAAGAAGCAGTTGTGTGGGAGGAGTTTTGCCAATTACGTTATTCCAATAACAATTTCCTAGGTAGGTTGAATGTCACAGGGAACATTGGCTTGGACAATAAAATGAATCTTTCAGAACCAGAAAAATTTGAGTCTGCTGTGAATAAGATACTCAATAATCTTACTGAGGTAGCATCTTTTAATGTTTCCTCAAAGAGTTATGCTACTGGAGAAGTACCTTATGAAGGTAAAACAATATATGCCTTGGTACAGTGCACTAGAGATTTATCAGCCAATGATTGCAGTATTTGCTTAAAAAGTTCCATAAGAGATATACCAGGTTGTTGCTATGCCTCAATTGGTGCCAGAGTTCTCAGTCGTAGCTGTTATTTGAGATATGAATTTTATCCATTTTATCTTGGTGCAACAGAGCCTAATTCCACAAGCTCTTTAATCAGCAATAATGAAGGCAAAAATAATTCAAGCAAAATATGGATGATTACAGCCATGGTAGTTGTGGTAGGCTTGGTGGTGATAATTTTTGTTTGCTTCATGTACTTTGTCAGGAATAAAAGAAATAGGCAAAGTAAGAATGGAATAGACAAAATATCTAAGGACTTCCCTTTTATTGATCTTGGATCTATTCGTGTGGCTACAAAGAACTTTTCTGATTCAAATAAGCTTGGACAAGGTGGCTTTGGCCCTGTTTACAAGGGGATACTTAGTGATGGCCAGGAAGTGGCAATCAAGAGACTCTCAACTTGCTCTGAGCAGGGCTCAGAGGAATTCATAAACGAGGTTATGCTGATAATGAAACTTCAACACAAAAATCTTGTAAAGCTTTTGGGATTTTGTGTAGATGGAGAAGAGAAGATTCTTGTATATGAATTTTTGCCTAATGGTAGCCTTGATGCTGTCCTTTTTGATGATCCAAAGCAAAAGGCACGGCTGGATTGGAACAAACGCCTGGACATAATAAATGGAATAGCAAAAGGGATTCTTTATCTTCATGAAGATTCTAGACTAAAAATAATTCACAGAGATCTAAAAGCAAGTAATGTGTTGTTGGACTCTGACATGAACCCAAAGATCTCAGACTTTGGAATGGCTAGGATATTTGCAGGAAGTGAAGGTGAAGCTAACACTGCTACAATAGTTGGCACATATGGATATATGGCTCCAGAATATGCAATGGAAGGGTTATATTCCATAAAATCTGATGTTTTTGGCTTTGGAGTTCTATTGCTTGAGATCATTACAGGGAAACGTAATGCAGGTTTCTATCACTCTAAAAGCGCTCCTAGCGCATGGCACCTATGGAATGAGGGAAAGGGGCTAGAGTTAAAGGATCCCTTGTTATCTGATTCATGCCTCGAAGATCAGTTTTTGAGATACATGAATATTGGACTGCTTTGTGTTCAAGAAGATGCATATGATAGGCCAACCATGTCTTCTGTTGTTTTGATGTTGAAGAATGAAACAGTAACACTTGGCCAACCAGAAAGACCTCCTTTCTCTGTAGGGAGACTCAATGTTAATGATAGTAATTGCGAAGAATGCATTTCTGGTGCAGACCTCATAGATACATATTGTCCAACTGAATTCCCAATTTACACCCCCAACGGTCCATTCCACAAGAATCTCAATCTTCTTATGGAGTCACTCTCCAACAACACAGCTTCAAGGGGAGGTTTCTATAACACAACTATAGGAGAAGGACTAGACATAGTGTATGGACAAGCACTCTGCAGAGGGGACATCACAAACTCCACAGTTTGCCAGGAATGTGTTCAGAAAGCAAGCAAAGATATAATGAATAGGTGTAAGAGTGAAGATGCAGTGATATGGTATGAGCTTTGCCAAGTTCGCTACTCCTTTCAGATGTTTTTCTCAATCATGGTTTATACGGGAAAATATCCAGAGCAGATTAAAAAGGAGAAGAATGTCTCAGATGATCCTATTAGATTTGAAGAAGTCATGAAGTTTTTAATGGAGAATCTGTCAAATGAGGCAGCTTTTAATCCTGCTAGGAACATGTTTGCTGCTGGGGAAATTGAGTTTCCTAGGAAGAAGACAATTTATGGTCTAGTCCAATGTACCAGGGACATTTCTGAAACAGACTGCAGTAGTTGTTTGAGTACTGCATTTTCAGAATTGACTACATGCTGCTCCCACAGGGAAGGGGGGGTTATTGTTAGTAGGAATTGCAATATGAGGTTCGGTTTGTCTGAGTTCTTCAATACTTCTTCAGCATACCTGTTGATTTACCCAACTTCCAAAGATGAAGAAAATATCGAGAGGACACTATTACAAGAATTGTCCAGCCCCAAGAATGTAGCAATTACACAAGAAGGTGAGTTGATTAGTTCTGATGAACTGTTGTTCATGCCTTTAGCAACCATTAAGGCCGCTACTGGTGACTTTTCTGATACAAATAAGCTTGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTACCAGATGGTAATGAAATAGCAGTTAAAAGATTATCAAGAAAGTCTTGGCAAGGCATAGAGGAATTCAAGAATGAGGTCATACTAATTGCCAAACTTCAACACAGGAATTTGGTGAGGCTATTGGGCTGTGTCTTAGAGGGAGATGAAAAGATACTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAGTTTATCTTTGATCCAGAAAAACGTACCAAACTTGATTGGAACACATGCTATGGCATTATCAGTGGCATAGCTAGAGGGCTACTTTATCTTCATGAGGAGTCTCGGCTTAAAATCATTCACCGAGATCTCAAGCCAAACAATGTCTTGTTAGACCATGAACTTGTTGCAAAAATATCAGATTTTGGTATGGCCAGGATATTTTCTGAGAATCAGAATACAGCAAACACAAAAAGAGTTGTGGGAACGTATGGATATATGTCTCCAGAATATGCAATGGAGGGGTTGTTCTCTGTGAAATCTGATGTGTTCAGCTTTGGTGTTATCTTGCTGGAAATCATCAATGGGAAAAGAAATAGCGGCTTTTACATAACAGAACTTGCTCCGACACTGCTAGTATATGCATGGCGGTTGTGGAATGAAGGAAAAGAATTGGAGTTTGTGGATCCTGTGTTACTGGAATCATGTCTTGATTCTCAATCTGAAGTTCTAAGGTGCATGCAGATTGGGCTTTTATGTGTGCAGGAAGATCCAGAACAGAGGCCCACTATGTCAGATGTGGTGGTTCTTCTAGGAAGTGAATCAATGGCTCTTCCTCAACCAAGGCAACCAGCATTTTCTTTGGGTAGGGTGCTTCATGTTGTGGACCCATCTACATCAACAAATCCTTCAGTCAATGAGAGTATATGGTCTAAAATTGTACCTAGATGA 3699 0.3928 MIHSLMVSKSIQVLFFLCTLAFLSEVAFSDPPYEICSTSSSYANGSSFQRNLRSLLLSLPSNASISKSYNTSSGFAPDGVYVLYMCLNYVSNETCHKCITTAIGDIVKLCPQSKEAVVWEEFCQLRYSNNNFLGRLNVTGNIGLDNKMNLSEPEKFESAVNKILNNLTEVASFNVSSKSYATGEVPYEGKTIYALVQCTRDLSANDCSICLKSSIRDIPGCCYASIGARVLSRSCYLRYEFYPFYLGATEPNSTSSLISNNEGKNNSSKIWMITAMVVVVGLVVIIFVCFMYFVRNKRNRQSKNGIDKISKDFPFIDLGSIRVATKNFSDSNKLGQGGFGPVYKGILSDGQEVAIKRLSTCSEQGSEEFINEVMLIMKLQHKNLVKLLGFCVDGEEKILVYEFLPNGSLDAVLFDDPKQKARLDWNKRLDIINGIAKGILYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMARIFAGSEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLLEIITGKRNAGFYHSKSAPSAWHLWNEGKGLELKDPLLSDSCLEDQFLRYMNIGLLCVQEDAYDRPTMSSVVLMLKNETVTLGQPERPPFSVGRLNVNDSNCEECISGADLIDTYCPTEFPIYTPNGPFHKNLNLLMESLSNNTASRGGFYNTTIGEGLDIVYGQALCRGDITNSTVCQECVQKASKDIMNRCKSEDAVIWYELCQVRYSFQMFFSIMVYTGKYPEQIKKEKNVSDDPIRFEEVMKFLMENLSNEAAFNPARNMFAAGEIEFPRKKTIYGLVQCTRDISETDCSSCLSTAFSELTTCCSHREGGVIVSRNCNMRFGLSEFFNTSSAYLLIYPTSKDEENIERTLLQELSSPKNVAITQEGELISSDELLFMPLATIKAATGDFSDTNKLGQGGFGAVYKGVLPDGNEIAVKRLSRKSWQGIEEFKNEVILIAKLQHRNLVRLLGCVLEGDEKILIYEFMSNKSLDQFIFDPEKRTKLDWNTCYGIISGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELVAKISDFGMARIFSENQNTANTKRVVGTYGYMSPEYAMEGLFSVKSDVFSFGVILLEIINGKRNSGFYITELAPTLLVYAWRLWNEGKELEFVDPVLLESCLDSQSEVLRCMQIGLLCVQEDPEQRPTMSDVVVLLGSESMALPQPRQPAFSLGRVLHVVDPSTSTNPSVNESIWSKIVPR. 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02101 1232 FunFam Cysteine-rich receptor-like protein kinase 28 32 131 - -
Seca7g02101 1232 CDD STKc_IRAK 334 598 - -
Seca7g02101 1232 Pfam Protein tyrosine and serine/threonine kinase 917 1185 IPR001245 GO:0004672|GO:0006468
Seca7g02101 1232 Pfam Protein tyrosine and serine/threonine kinase 331 594 IPR001245 GO:0004672|GO:0006468
Seca7g02101 1232 Gene3D - 745 851 IPR038408 -
Seca7g02101 1232 Gene3D - 142 244 IPR038408 -
Seca7g02101 1232 Gene3D - 31 132 IPR038408 -
Seca7g02101 1232 Gene3D - 629 735 IPR038408 -
Seca7g02101 1232 ProSiteProfiles Protein kinase domain profile. 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02101 1232 ProSiteProfiles Protein kinase domain profile. 914 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02101 1232 SUPERFAMILY Protein kinase-like (PK-like) 309 596 IPR011009 -
Seca7g02101 1232 ProSiteProfiles Gnk2-homologous domain profile. 138 244 IPR002902 -
Seca7g02101 1232 ProSitePatterns Protein kinases ATP-binding region signature. 920 942 IPR017441 GO:0005524
Seca7g02101 1232 FunFam Cysteine-rich receptor-like protein kinase 10 294 403 - -
Seca7g02101 1232 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 612 - -
Seca7g02101 1232 FunFam Uncharacterized protein 990 1193 - -
Seca7g02101 1232 ProSiteProfiles Gnk2-homologous domain profile. 743 851 IPR002902 -
Seca7g02101 1232 FunFam Cysteine-rich receptor-like protein kinase 10 746 851 - -
Seca7g02101 1232 Gene3D Phosphorylase Kinase; domain 1 878 989 - -
Seca7g02101 1232 Gene3D Phosphorylase Kinase; domain 1 290 403 - -
Seca7g02101 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1035 1047 IPR008271 GO:0004672|GO:0006468
Seca7g02101 1232 FunFam Cysteine-rich receptor-like protein kinase 10 141 244 - -
Seca7g02101 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Seca7g02101 1232 FunFam Cysteine-rich receptor-like protein kinase 10 877 989 - -
Seca7g02101 1232 FunFam Liguleless narrow1 404 604 - -
Seca7g02101 1232 ProSiteProfiles Gnk2-homologous domain profile. 30 132 IPR002902 -
Seca7g02101 1232 Gene3D Transferase(Phosphotransferase) domain 1 404 605 - -
Seca7g02101 1232 Gene3D Transferase(Phosphotransferase) domain 1 990 1194 - -
Seca7g02101 1232 Pfam Salt stress response/antifungal 757 847 IPR002902 -
Seca7g02101 1232 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Seca7g02101 1232 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Seca7g02101 1232 Pfam Salt stress response/antifungal 642 732 IPR002902 -
Seca7g02101 1232 SUPERFAMILY Protein kinase-like (PK-like) 896 1186 IPR011009 -
Seca7g02101 1232 ProSiteProfiles Gnk2-homologous domain profile. 631 735 IPR002902 -
Seca7g02101 1232 CDD STKc_IRAK 920 1184 - -
Seca7g02101 1232 SMART serkin_6 328 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02101 1232 SMART serkin_6 914 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02101 Seca-Chr7 47839532 47850722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02101 13 611 Receptor kinase-like Gene Family AT4G05200 44.462 3.20e-166 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g02101 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02101 - - rcn:112201911 1533.47