Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02086 ATGGTTTATAATCCCTTCTCCACTGAGAGATGGAGGGACTTTTTCTTGGAAGACCTATTTTTAAGAAAATTCTCTTGTTTGCTTCCCGATGGAGTAATATCTTGTATAACACATCTTTTCTTGGAAGACCTCCTTAATGCACTGCGATCTCAAGGGCTTCTGGTGGCTGCCATTGAGCCTATGCCGGAGAATAATGTGTCAAAGATGGAGGAGAGAAGCCAAGAGGAACGAGAGAAATGGTGGAAAATGGGGTTGAAGGCTATTTCAGATGGCAAGTTAGTTGTCTTGCTTTTATCCGGTGGCCAGTTTTCTGCCTTTTGCTGCTTCAGTAGTCCCATGTATGCATTATATTATTTCAGATTATATCAGGCTGATATTATTTTTGTTGAGAAGGATTCGTGTGTTTTTGGAGAGAATGGGATCTTCAATTTGTGGCAACTGGACTGGAAACGGAATGGACATGTGTCTAAGATGCCTCAAATAATCCTTCTTGCAACCAATATTAGTAAAATTGAATTTGATAAAGCTAAAGTTGCAGGTTTCAGTGATACAGTTATCATGAAGCCACAGAGAGCTAATATGGTGGCTGCTTGTCTTTAG 600 0.4017 MVYNPFSTERWRDFFLEDLFLRKFSCLLPDGVISCITHLFLEDLLNALRSQGLLVAAIEPMPENNVSKMEERSQEEREKWWKMGLKAISDGKLVVLLLSGGQFSAFCCFSSPMYALYYFRLYQADIIFVEKDSCVFGENGIFNLWQLDWKRNGHVSKMPQIILLATNISKIEFDKAKVAGFSDTVIMKPQRANMVAACL. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02086 199 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 112 IPR029044 -
Seca7g02086 199 SUPERFAMILY Nucleotide-diphospho-sugar transferases 48 102 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02086 Seca-Chr7 47393848 47395819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02086 123 199 Histidine Kinase Gene Family AT2G01830 52.564 2.62e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02086 K14489 - gmx:100789894 127.102