Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02067 ATGGTATTGTATGCAGGGGGTGGAAGGAAAGTGACACGAGTTGAGGTAACACTGGACGGTGGAGAGACGTGGCACGTGTGCAATCTGGACCACCCAGAGAAACCCAACAAATACGGGAAGTACTGGTGCTGGTGTTTTTGGTCTTTGGAGGTAGAGGTGCTGGACCTACTTGGGACCAAGGAGATTGCTGTTCGCGCGTGGGATGAGGCCCTCAATACCCAACCTGAAAATCTCATTTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGGGTGAAAACGAACGTGTGCAAGCCACACAAGGGTGAGATTGGAATAGTATTTGAACACCCAACTCAACCAGGAAACCAATCAGGAGGATGGATGGCAAAGGAAAGACACTTAGAAAGATCACAAGAATCCAACCAAACTCTCAAGAAGAGTGTCTCCACACCATTCATGAACACTTCTTCAAAAATGTTCTCCCTCTCCGAAGTGAAAAAACACAGCAACCCCGACTCCGCTTGGATCATCGTCCACGGCCATGTCTACGACTGCACCCGCTTCCTCAAAGACCATCCCGGCGGAGCCGACAGCATCCTCATCAACGCCGGCACCGACTGCACGGAGGAGTTCGAGGCAATCCATTCCGATAAGGCAAAGAAAATGCTCGAAGATTATAGAATAGGTGAACTCATAACCACAGGCTACAACTCAGACTCATCTCCCAATAACTCCCTCCATGGAAATTCCGAAATTACCCCTCACTTAGCCCCTATCAAAGAAATCATCACAACACCCACACGTAGTGTGGCTCTTAACCCACGCGAGAAAATCCCATGCAAGCTTGTCTCCAAAATCTCCATCTCTCACGACGTTAGGATCTTCCGTTTTGCATTACCTTCTGAGGATCAACTCTTGGGGTTACCCGTAGGGAAGCACATTTTCCTATGTGCCGCAATTGACGGGAAGTTATGCATGCGAGCTTACACTCCAACAAGCGACGTTGATGAAATCGGATATTTTGAGTTAGTTGTGAAGATTTATTTCAAAGGCGTGCACCCCAAGTTTCCCAACGGTGGACTCATGTCACAGCATTTGGACTCGTTGCCTATGGGGTCAGTATTGGACGTGAAAGGCCCATTGGGCCATATTGAGTACAATGGGAGAGGGAACTTTTTGGTTCACGGGAAGCAAAGATTTGCGAAGAGGCTTGCCATGTTGGCTGGTGGGACCGGGATCACACCTATTTACCAGGTGGCACAAGCGATTCTGAAGGACCCAGAGGATCGCACTGAAATGCATGTAGTGTATGCGAACCGGACGGAGGATGATATATTGTTGAGGGAAGAGCTTGATGAATGGGCGAAGAAGTATGGTGATAGGTTCAAGGTGTGGTATGTGGTGGAGAGTGCGAAGGATGGGTGGGAATACAGTGTGGGGTTCATCACGGAGAGTATCATGAGGGCGCATGTTCCTGAGGCTGGAGAGGATACGTTGGCTTTGACTTGTGGCCCACCACCTATGATTCAGTTTGCGGTTCAGCCTAATTTGGAGAAGATGGGGTATGACGTCAAGAACGATTTGCTAGTGTTTTAG 1581 0.4883 MVLYAGGGRKVTRVEVTLDGGETWHVCNLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLERSQESNQTLKKSVSTPFMNTSSKMFSLSEVKKHSNPDSAWIIVHGHVYDCTRFLKDHPGGADSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELITTGYNSDSSPNNSLHGNSEITPHLAPIKEIITTPTRSVALNPREKIPCKLVSKISISHDVRIFRFALPSEDQLLGLPVGKHIFLCAAIDGKLCMRAYTPTSDVDEIGYFELVVKIYFKGVHPKFPNGGLMSQHLDSLPMGSVLDVKGPLGHIEYNGRGNFLVHGKQRFAKRLAMLAGGTGITPIYQVAQAILKDPEDRTEMHVVYANRTEDDILLREELDEWAKKYGDRFKVWYVVESAKDGWEYSVGFITESIMRAHVPEAGEDTLALTCGPPPMIQFAVQPNLEKMGYDVKNDLLVF. 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02067 526 PANTHER NADH-CYTOCHROME B5 REDUCTASE 137 522 IPR001834 GO:0016491
Seca7g02067 526 FunFam Nitrate reductase 2 146 - -
Seca7g02067 526 Gene3D - 148 229 IPR036400 -
Seca7g02067 526 Pfam Oxidoreductase FAD-binding domain 275 381 IPR008333 -
Seca7g02067 526 Gene3D Translation factors 262 376 - -
Seca7g02067 526 Pfam Mo-co oxidoreductase dimerisation domain 4 97 IPR005066 GO:0016491|GO:0030151
Seca7g02067 526 PRINTS Eukaryotic molybdopterin domain signature 40 50 IPR008335 GO:0016491
Seca7g02067 526 PRINTS Eukaryotic molybdopterin domain signature 65 77 IPR008335 GO:0016491
Seca7g02067 526 PRINTS Eukaryotic molybdopterin domain signature 13 25 IPR008335 GO:0016491
Seca7g02067 526 PRINTS Eukaryotic molybdopterin domain signature 78 91 IPR008335 GO:0016491
Seca7g02067 526 PRINTS Cytochrome B5 signature 187 201 IPR001199 -
Seca7g02067 526 PRINTS Cytochrome B5 signature 202 209 IPR001199 -
Seca7g02067 526 PRINTS Cytochrome B5 signature 214 226 IPR001199 -
Seca7g02067 526 PRINTS Cytochrome B5 signature 177 187 IPR001199 -
Seca7g02067 526 CDD cyt_b5_reduct_like 275 521 - -
Seca7g02067 526 Pfam Cytochrome b5-like Heme/Steroid binding domain 156 226 IPR001199 -
Seca7g02067 526 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 369 520 IPR039261 -
Seca7g02067 526 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 152 227 IPR001199 -
Seca7g02067 526 SUPERFAMILY E set domains 4 97 IPR014756 -
Seca7g02067 526 FunFam Nitrate reductase 148 229 - -
Seca7g02067 526 PRINTS Cytochrome B5 reductase signature 400 419 - -
Seca7g02067 526 PRINTS Cytochrome B5 reductase signature 494 502 - -
Seca7g02067 526 PRINTS Cytochrome B5 reductase signature 322 329 - -
Seca7g02067 526 PRINTS Cytochrome B5 reductase signature 367 381 - -
Seca7g02067 526 PRINTS Cytochrome B5 reductase signature 301 312 - -
Seca7g02067 526 PRINTS Cytochrome B5 reductase signature 438 449 - -
Seca7g02067 526 FunFam NADH-cytochrome b5 reductase 261 376 - -
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 186 196 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 354 363 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 438 449 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 426 435 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 494 502 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 470 486 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 322 329 IPR001709 GO:0016491
Seca7g02067 526 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 400 419 IPR001709 GO:0016491
Seca7g02067 526 Gene3D - 377 526 IPR039261 -
Seca7g02067 526 SMART Cyt_b5_2 155 227 IPR001199 -
Seca7g02067 526 SUPERFAMILY Riboflavin synthase domain-like 263 382 IPR017938 -
Seca7g02067 526 Gene3D - 3 146 - -
Seca7g02067 526 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 270 382 IPR017927 GO:0016491
Seca7g02067 526 Pfam Oxidoreductase NAD-binding domain 401 508 IPR001433 GO:0016491
Seca7g02067 526 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 150 234 IPR036400 -
Seca7g02067 526 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 183 190 IPR018506 GO:0020037
Seca7g02067 526 FunFam Nitrate reductase [NADH] 377 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02067 Seca-Chr7 46773670 46779309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02067 257 517 NADPH P450 reductases AT5G17770 40.684 2.57e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02067 K10534 - gmx:100813471 981.474