Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02065 ATGAATCACCTACCTCGAATCTTCGGTCATAGAAAGCAGCCCAAAAAGGGCGTGGATCCCAAGATGATCCTAAGGAAACAACCGAAGCTGGAACGCCGCAATGCCGCGAAGCACTTCGACTACGATGCTGAAGCTTCATCGCCATCGTCGTCGCTTGACTACTCCGGCACGACCTCGCTTCTCTACACCCGATCCATGGATTTCTACGACAAAACCAGCTTCCGAATCGATGGAAACGAGGGCGAGTTAGATGTTATTTGCAAGAGCCTCGGACTCTCCGGGCCGGAGGATTTCTCCATCCCGGCAGAGGCGTGGGAGGCCATGAAGTTCCGCTCTTCGTCGGATATTCTGCCAAGGCTGGACCTCGTTGATTTCGAAGAAGCGAAGGAAAACGACGAAATCGGAGTAGTAGAGTGCGAAGATAGGGTTCCGATTAGGGGTTTTGATGAGTGTACTCCAGCTGAGAGCAGCGGATGCTGCACCGGCGGAGGCGGCGACGAAGATAGGGTTGCGATTAGGTGTTGTGATGAGACTAGCGGTTGTTGCTCCGGCGGCGACGATAGGGTTCCGATTAGGGGTTTAGATGAGTGCGCTCCAGCCGAGACTAGTGGCGGCGGCGGCGAAGATAGTGTTTCGACTAGGGATTTCGATGAGTGTGCTCCTGCCGAGACCAGCGGTTGCTGCTCCGGCGGCGGCGGTATCAAGGGATTTCGGCCTGCGATGCTTAAGCCGCCGCCGGGGATTAGGGTTTCGGTCATCGACGACACGTGCTCCACGTGGGATCTTATGAGGGATTTTGCTCCGCCTGGGGAAGAAGGAGGAAAGGAAAGTTATGTGGAGTTGAGTTCTTCCGATGATGACCGAGAAGAGAAGGAAGAGGAACAGGAACAGGAACATGAAGAAGAAAGGGGCGAAGTTGGTGGAGTGAGATTGAAGAGAGAAGCGGAGGAAAATACGGAGATTGTTGGTGATTTTTCGAGGTCGTGTTCGTTTACTACGTCAAATGAAGATGATTCCTCTAGCACCACCACGGATCCTAGGTCCAATAGTATATCTCCTAACGTGAGAGTCAAGCGTGTTATTACCCCTGGCTGGCAAAAGGGTGGGCGTTTGGGGAGTGGTTCGTTTGGCACTGTCTATGAAGGAATTTCTGAAGATGGATTCTTCTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTTTATCAACTGAAGCAGGAGATTGAACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAGTACTTTGGCACTGAAATGGATGAATCAAATCTGTATATCTTTCTTGAGCTTGTAACCAGAGGTTCGCTTTTAAGCCTCTACCAGAGGTATACTCTTCGCGATTCCCAAGTATCTGCCTATACAAGACAGATTCTGCATGGTTTAAAGTATCTACATGATCGAGATATTATTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCCGTCAAGCTCACAGATTTTGGATTGGCAAAGGCAATCAAATTGCATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTAGTAAAAGGAAAAAATAAAGGTTATGGGCTTCCGGCTGATATATGGAGTCTGGGATGCACTGTGTTGGAGATGTTAACGGGCAAAATTCCATACCATCCTTTGGAATGGATGACGGCATTGCTTAGAGTTGGAAAAGGTCAGCCACCTCCTGTGCCTGATTTCCTTTCAAGAGATGCACGTGATTTTATACTGCAGTGTCTTAAAGTTAATCCAGATGATCGTCCCACAGCTGCTCAACTCATAAACCATAAATTTGTCCAAAGGTCACATTCTCAGTCCTCTGGCTCTGCATCTCCTTATCCCAGAAGAGGTTAA 1911 0.4835 MNHLPRIFGHRKQPKKGVDPKMILRKQPKLERRNAAKHFDYDAEASSPSSSLDYSGTTSLLYTRSMDFYDKTSFRIDGNEGELDVICKSLGLSGPEDFSIPAEAWEAMKFRSSSDILPRLDLVDFEEAKENDEIGVVECEDRVPIRGFDECTPAESSGCCTGGGGDEDRVAIRCCDETSGCCSGGDDRVPIRGLDECAPAETSGGGGEDSVSTRDFDECAPAETSGCCSGGGGIKGFRPAMLKPPPGIRVSVIDDTCSTWDLMRDFAPPGEEGGKESYVELSSSDDDREEKEEEQEQEHEEERGEVGGVRLKREAEENTEIVGDFSRSCSFTTSNEDDSSSTTTDPRSNSISPNVRVKRVITPGWQKGGRLGSGSFGTVYEGISEDGFFFAVKEVSLLDQGSQGKQSVYQLKQEIELLSQFEHENIVQYFGTEMDESNLYIFLELVTRGSLLSLYQRYTLRDSQVSAYTRQILHGLKYLHDRDIIHRDIKCANILVDANGSVKLTDFGLAKAIKLHDVKSCKGTAFWMAPEVVKGKNKGYGLPADIWSLGCTVLEMLTGKIPYHPLEWMTALLRVGKGQPPPVPDFLSRDARDFILQCLKVNPDDRPTAAQLINHKFVQRSHSQSSGSASPYPRRG. 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02065 636 FunFam Mitogen-activated protein kinase 1, putative, expressed 363 630 - -
Seca7g02065 636 MobiDBLite consensus disorder prediction 301 321 - -
Seca7g02065 636 MobiDBLite consensus disorder prediction 286 300 - -
Seca7g02065 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Seca7g02065 636 MobiDBLite consensus disorder prediction 323 353 - -
Seca7g02065 636 SMART serkin_6 365 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02065 636 MobiDBLite consensus disorder prediction 263 353 - -
Seca7g02065 636 Gene3D Transferase(Phosphotransferase) domain 1 364 631 - -
Seca7g02065 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 251 630 - -
Seca7g02065 636 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Seca7g02065 636 Pfam Protein kinase domain 366 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g02065 636 SUPERFAMILY Protein kinase-like (PK-like) 342 623 IPR011009 -
Seca7g02065 636 ProSiteProfiles Protein kinase domain profile. 365 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02065 Seca-Chr7 46606800 46614800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02065 29 620 MAP Kinase Kinase Kinase AT4G08500 50.500 1.91e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca7g02065 Pkinase 1.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02065 K13414 - gmx:100819177 741.11