Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02063 ATGTTTCGCAAGCAGGTAGGGAACTTTATGCACTACATAAGTTGGTTTATTGTGGGCTTTACTGTTGGCTTTGTCAGAGTGTGGCAGATCAGTTTAGTGACACTATCAATTGTCCCCTCTATTGCATTTGCGGGAGGCTTTTATGCATATGGGACATTTGGGCTCATTTCAAAAGTTCGGAAAGCCTATGTGAGGGCTAGTGAAATCGCTGAAGAGAACTTTGAGTGTTCGGTTTTTGAAGGGCTAAAAGCCATACTGGACCTTTCCATCATTGTTAACAAATTTCAAATTAAAAAGAGGAATTTCCTCTTCAAAAACTATTCACTCCATTATGGATGA 339 0.3982 MFRKQVGNFMHYISWFIVGFTVGFVRVWQISLVTLSIVPSIAFAGGFYAYGTFGLISKVRKAYVRASEIAEENFECSVFEGLKAILDLSIIVNKFQIKKRNFLFKNYSLHYG. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02063 112 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 75 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g02063 112 PANTHER ABC TRANSPORTER B FAMILY 4 75 IPR039421 -
Seca7g02063 112 SUPERFAMILY ABC transporter transmembrane region 5 74 IPR036640 GO:0005524|GO:0016020
Seca7g02063 112 Gene3D ABC transporter type 1, transmembrane domain 1 78 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02063 Seca-Chr7 46483807 46485565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02063 4 72 Calmodulin-binding Proteins AT2G36910 42.029 2.46e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02063 K05658 - gmx:100819045 109.383