Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02056 ATGAATGTAGCTTCAATTCCAATGGTTGAAGGTGTAGAGAAATGGGTCGATAATATTCACAGCAATATTGTGCAACATGGCCAAGAGTGTGTTACTGACTATAGACCACACTTGGAAATGGAGTTTGAATCCGAGGTAGCTGCCTATGAATTTTACAATGAGTACAATAAGAGGGTTGGGTTTGGTATTCGTCGAGAATATGGACATAAAAGCAAAAAAGATGGAATTTTGACTTCAAGAAGATTCTCATGCTTCAAAGAGGGCAAACGAGTCGTTGACAAACGAGACCACTTGACGAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCCCGTATGGTTATTTCACTTGATCGGAAGATAGGGAAATACAAGGTTATTGACTTTATAGCTCAACATAATCACCCTCTTCAATCGACAAAATATGCTTATATGATTCGTTCTCATCGAAAAATTTCTGAGTCACAAGCATCACACATTGTATTGGCAGATGCATCTGGATTGAAACCAAAAGATTTTCATGAATATGTGTCCAAGCAATCTGGTGGAATAGACAGTGTTGGTTACACAAGACAAGACCACAAGAATTACCTTCAAACTAAAAGGAATCAATGTTTAAGGTATGGTGAAGTGGGTGCATTGCTGATGTACTTCAAACAGCAAAGTGAAAATCCTTCATTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAATAGATTTTGGGCAGATGCACAAATGATAAATGATTATGGGTACTTTAGTGATGTCATCACTTTTGACACCACATACAAGATAAATAAGGATTATCGACCCCTAGGAGTATTTTTTGGGCTTAATAATCACAGGCAGACAATTGTTTTTGGGGCAACATTGCTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACTTTCCTCAAAGCAATGGGTGGAAAAAGCCTAAAACCATTCTAA 972 0.3724 MNVASIPMVEGVEKWVDNIHSNIVQHGQECVTDYRPHLEMEFESEVAAYEFYNEYNKRVGFGIRREYGHKSKKDGILTSRRFSCFKEGKRVVDKRDHLTKEPRAETRTGCEARMVISLDRKIGKYKVIDFIAQHNHPLQSTKYAYMIRSHRKISESQASHIVLADASGLKPKDFHEYVSKQSGGIDSVGYTRQDHKNYLQTKRNQCLRYGEVGALLMYFKQQSENPSFFYDFQMDVEEQITNRFWADAQMINDYGYFSDVITFDTTYKINKDYRPLGVFFGLNNHRQTIVFGATLLYDETIPSFQWLFETFLKAMGGKSLKPF. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02056 323 Pfam MULE transposase domain 260 319 IPR018289 -
Seca7g02056 323 PANTHER OS01G0519700 PROTEIN 32 319 - -
Seca7g02056 323 ProSiteProfiles WRKY domain profile. 65 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g02056 323 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02056 Seca-Chr7 46083484 46084455 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g02056 FAR1 5.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02056 - - psat:127085847 497.664