Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02026 ATGATAAAGGAAGAACTTGGTTGTGATCATTGCAGGTTTTGTGACTTGAGCTCTGTTTTGGAACCTGGGAGACCTGTGAAAACAGATAAACCAGCTATACTTGATGATGCTATCAGAGTCTTGAGCCAGCTTAGAACTGAAGCTCAGGAACTCAAAGAAACAAATGAAAAATTATTAGAGGAAATAAAATGTTTAAAGGCAGAGAAAAACGAACTCCGTGAAGAGAAACTTGTTTTGAAAGCAGATAAAGAAAAGATTGAGAGGCAGTTGAAAGCTATGCCTATTCCACCTGCAGGGTTTATGCCTCCCCCTGTAGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAACTATGGCTACATCCCAATGTGGCAATATCTTCCTCAATCTGCTCGAGATACATCCCATGATCATGAGCTCAGACCACAAGACAATAAGGTTCACTGCTACTTAATAGTTTCACTGTGCATCCCTTTATTCTCTTCACATTTTTATTCATTGAGAAAGGAATTTGCACTCTGA 531 0.3992 MIKEELGCDHCRFCDLSSVLEPGRPVKTDKPAILDDAIRVLSQLRTEAQELKETNEKLLEEIKCLKAEKNELREEKLVLKADKEKIERQLKAMPIPPAGFMPPPVAAYQAGVNKMAVYPNYGYIPMWQYLPQSARDTSHDHELRPQDNKVHCYLIVSLCIPLFSSHFYSLRKEFAL. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02026 176 Gene3D - 33 94 - -
Seca7g02026 176 PANTHER BHLH TRANSCRIPTION FACTOR 12 146 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Seca7g02026 176 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 71 IPR036638 GO:0046983
Seca7g02026 176 Coils Coil 34 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02026 Seca-Chr7 44218842 44220310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02026 12 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 74.627 2.90e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02026 - - gmx:100787583 238.81