Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02020 ATGAAAGAGAACAACGACATGAGCGGGAATGATTTCGAGGCGCCTGCGTTCACAAAATCACCAGAAATTCCTCCTCCTTTTGTTTCTTTTCCGTTCACCGATCTGTACTTTGTTGCTGATATCGATGAAGATTCCACCACAAAACTAGAGTGGAAATCATCTCCAGATCCTTTTACTTTTGGCGATTTTGGATTCAAATCCAAGAAAACTTCAAAAGGTTTAGTGATCGCTTCATCGAACAGCGGCAGTGAGGGAAGGATTTCTCTACAGAATTCTGATTCTGAATTGAAGCTGATGCAGATTGATGGTGAAGACCTTGGTATTCCTGAGGCTGAAAATGGCGTGTCCGAGAGTGTTGCTACTGCGATGTTGTTTGTTACTGTGAAGCCACAACTGCTTGTGAAAGCTCCGAAGGCAAACGACGCCACGTTTGGCACAGAAGAAGCTGGTCGAACACTGAACCCTAAGCGAAAGGCAGAGCTTTCTCTCATACTCTCAGCCGAGGCTAAACATGTTGAGAATGCTTGGGTTGAGAATTTTTGGTTATGTGATGGAATCCTTAATTGTTTCAAAGATCTTCGAGTTGGTGCTTTAGGTTTTGTGGCTTCAGCTGCCAATGTTTTTGAAATGTCTGATGAAATGGCTATGAGAGTTGTAAGTGTTGTAGAGTTGTTTCTATTTGGGAGTGTTGCTGAGGTTGAATTCAAAACTATAGGAGAAAACCATAACCGAGGCGAGCTTGGGGTTGAGATCTTGGTCTCTAGTTTTGTCTTTGAGGAAGATGATTTTATAAGGCTGTGGGAATCCAAGAATCTATTTGCAGTGAGCTCTGCAATTCAGGATTGGCTTATTTCAAAAATTGCGATGGAGTTGATGCAACAAGGGGGAATGATGACTGTCTTGAGTGCTCTTGTAACTGCATTGGCTTGGCCAGCTGCATTACTTGCAGGTACTGATTTCATAGACAGCACAAGGGTAGAACATGTCTATGCGGTTGAGTGCTCCCATATGGCTGACATGGCCAAGGAGAAAGTTGAAACTACTGCTGGTATAAGAATACATACAGTATTTGAATCAAAGCTTGGGTTCACTGTCTACCCCTCTCCTCAGGTGTCCACATCTGTTGTTGAGTCATACAACAGTGTCCTCTCTACCCACTCCCTCTTGGAGCACACCGATGTTGTTGTTCTATTGGACTATGAAAGCAAAATAAGTCTTAATGGTTCTGCAAATAATAGTAATAGCACTGCACCAGCTACAAAGGCAAGAACTGGTTGGCTATCCATTGCACTTATTCCAAACCCAATTGCGTTCTTGTTGCTTGCTGCATCAGATAGTCCTCTGGCACTACATACAGGCACTACACTAATTGGGTTGAGTTCGGGTTTCATATTTGCTGCTGCTGGGATTAATACCATAGCTGTTGGGATTACAGTGAATGCACTTGGGCATGGTGATATTGATTGGTTGAGAACTGTTATAGAACAAGCTGCTGGTGTATTTGTGCAATTGTGTGCGTGGACCAGCTGGATATTCTCAAGGTTGTTGGAGAATGCAGTGGTGTATTGTTTCTTTTGGTTTCAAGTTGATATTGGTTGA 1599 0.4296 MKENNDMSGNDFEAPAFTKSPEIPPPFVSFPFTDLYFVADIDEDSTTKLEWKSSPDPFTFGDFGFKSKKTSKGLVIASSNSGSEGRISLQNSDSELKLMQIDGEDLGIPEAENGVSESVATAMLFVTVKPQLLVKAPKANDATFGTEEAGRTLNPKRKAELSLILSAEAKHVENAWVENFWLCDGILNCFKDLRVGALGFVASAANVFEMSDEMAMRVVSVVELFLFGSVAEVEFKTIGENHNRGELGVEILVSSFVFEEDDFIRLWESKNLFAVSSAIQDWLISKIAMELMQQGGMMTVLSALVTALAWPAALLAGTDFIDSTRVEHVYAVECSHMADMAKEKVETTAGIRIHTVFESKLGFTVYPSPQVSTSVVESYNSVLSTHSLLEHTDVVVLLDYESKISLNGSANNSNSTAPATKARTGWLSIALIPNPIAFLLLAASDSPLALHTGTTLIGLSSGFIFAAAGINTIAVGITVNALGHGDIDWLRTVIEQAAGVFVQLCAWTSWIFSRLLENAVVYCFFWFQVDIG. 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02020 532 Gene3D Tubulin/FtsZ, GTPase domain 351 421 IPR036525 -
Seca7g02020 532 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 228 324 IPR007941 -
Seca7g02020 532 Pfam Protein of unknown function (DUF726) 261 324 IPR007941 -
Seca7g02020 532 SUPERFAMILY Tubulin nucleotide-binding domain-like 360 407 IPR036525 -
Seca7g02020 532 PRINTS Tubulin signature 386 406 IPR000217 GO:0005874|GO:0007017
Seca7g02020 532 PRINTS Tubulin signature 347 368 IPR000217 GO:0005874|GO:0007017
Seca7g02020 532 PRINTS Tubulin signature 372 385 IPR000217 GO:0005874|GO:0007017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02020 Seca-Chr7 44119212 44122569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02020 423 468 Nodulin-like Gene Family AT1G31470 72.340 3.67e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02020 - - gmx:100782894 145.976