Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02008 ATGATTAAAAAAATTGTTTTTTATGTGCAGGTGATAATCTCGTTTGGGAAGATACTAATACAATCAATTCGACCTGGAGTAGAAGTTCTAGGAAGAGTTCCAAGAACAGAAGCTTTCTGTGATGTTACTCAATATCCCATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTGTCAGAGAAAGAATACTGAAGTGGGTCATGGAAGAAGGAGATGAGCTTCAAGAATCTACTAAAGGAAAAGTGAAAGCAGTTATTCTAGACATGACAAACCTGATGAATGTTGATACTTCCGGAATTCTAGCACTTGAGGAACTACACAAGAGGTTGCTTTCACGCGGCGTAGAATTAGCTATGGTCAACCCGAGGTGGCTAGTAATTCACAAGCTTAAGGTTGCACACTTTGTCGACAAAATTGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCCGTAGACGCATGTCTCTCTTCTAAAATTGCTACCGCTTGA 531 0.4049 MIKKIVFYVQVIISFGKILIQSIRPGVEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVRERILKWVMEEGDELQESTKGKVKAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVGEAVDACLSSKIATA. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02008 176 SUPERFAMILY SpoIIaa-like 51 168 IPR036513 -
Seca7g02008 176 Gene3D STAS domain 24 171 IPR036513 -
Seca7g02008 176 ProSiteProfiles STAS domain profile. 61 168 IPR002645 -
Seca7g02008 176 CDD STAS_SulP_like_sulfate_transporter 45 161 - -
Seca7g02008 176 PANTHER SULFATE TRANSPORTER 8 169 IPR001902 GO:0016020|GO:0055085
Seca7g02008 176 FunFam Sulfate transporter 31 24 171 - -
Seca7g02008 176 Pfam STAS domain 45 164 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02008 Seca-Chr7 43384049 43385409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02008 9 173 Inorganic Solute Cotransporters AT5G10180 54.491 9.40e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02008 K17469 - gmx:100776591 304.679