Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g02007 ATGTCCTCAATGGGTCACCAAGATGATGAAAATCTTGAAACAAAAGAGATAGATGGGAGAAGTTTGTCATCTTCACAAGACCAAGAACCATACGTCCACAAGGTTGGAATTCCTCCAAGACAAAACCTCTTCAAGGAATTCCAATCCACTGTGAAAGAAACATTCTTTGCAGATGATCCTCTACGGTCCTTTAAGGATCAGTCTAAATCCCGGAAGTTCATCTTGGGCATTGAAGCCATATTCCCCATAGTTAGTTGGGGGAGAAATTATAGCCTCAAAAAATTTAGAGGGGATCTTATTTCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTAGCTCCACAGTATGGACTGTACTCCAGCTTTGTTCCACCACTGATTTATTCTGTCATGGGTAGTTCTCGTGACATTGCAATAGGACCAGTGGCAGTGGTTTCACTCTTGTTGGGGACTTTACTTCAGAATGAGATTGATCCCAATGAAAATCCAGAAGACTATCGACGACTTGCTTTTACTGCCACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGGGTTTTCAGGTTAGGATTCTTGATTGATTTCTTATCTCATGCTGCAATTGTTGGTTTTATGGGGGGAGCTGCCATCACAATTGCCCTTCAACAGCTTAAAGGATTCCTTGGGATTGCAAAGTTCACAAAGAAAACTGATATTATCTCTGTGATGGATTCAGTATTCTCATCAGCCCATCATGGATGGAACTGGCAAACTATAGTAATTGGAGCTACCTTTCTAGCTTTTCTTCTGTTTGCTAAGTATATTGGAAAGAAGAGCCAGAAATTCTTCTGGGTTCCAGCAATTGCCCCATTGATATCTGTTGTACTCTCCACATTTTTTGTATACATAACTCGTGCAGACAAGCATGGTGTTGCAATTGTAAAACACATAGAGAAAGGGATCAATCCTTCATCTGTCAAGGAAATTTATTTTAGTGGCGATTACCTTGGGAGAGGTGTCAGAATTGGCATTGTGGCTGGCATGATAGCATTGACTGAAGCAATAGCAATTGGAAGAACATTTGCTTCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGATGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGTTATGTTGCAACTGGTTCTTTCTCTCGGTCAGCAGTAAATTTCATGGCTGGCTGTGAAACTCTAGTCTCCAATATTATCATGTCATTTATTGTGTTCTTGACCCTGCAATTCATCACACCTCTTTTCAAATACACTCCAAATGCCATCCTTTCTTCAATCATCATTTCTGCTGTCATCAACCTTGTGGACTACAAAGCAGCAATTTTGATATGGAAGATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGGGTTGTTTTTGCCTCAGTTGAGATAGGACTCTTAATAGCTGTCTCTATATCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCTCGAACTGCTATTCTGGGGAAGATCCCTAGGACAACTGTCTATAGAAACATTCAACAATACCCAGAGGCCATGAGGGTTCCTGGTGTATTGATTATAAGAGTTGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGCTGATGGATGAGGAAGAACGAGTGAAAGTCGACTACCAAACAAGAATCCAATTTTTAATAGTTGAGATGTCACCCGTTACTGACATCGATACCAGTGGCATCCATGCCCTTGAAGAGTTAAATAGAAGTCTTCAAAAGAGAGATGTTAAGCTTGTTCTGGCAAATCCAGGCCCAGTAGTGATAGACAAACTCCACACATCTAACTTTGCTAACTTGCTTGGTGAGGACAAGATCTTCCTTACAGTTGCAGAAGCTGTTGCATACTGTTCTCCAAAGCTGGCTGAGGACCCTTGA 1977 0.4036 MSSMGHQDDENLETKEIDGRSLSSSQDQEPYVHKVGIPPRQNLFKEFQSTVKETFFADDPLRSFKDQSKSRKFILGIEAIFPIVSWGRNYSLKKFRGDLISGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYSVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPNENPEDYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIAKFTKKTDIISVMDSVFSSAHHGWNWQTIVIGATFLAFLLFAKYIGKKSQKFFWVPAIAPLISVVLSTFFVYITRADKHGVAIVKHIEKGINPSSVKEIYFSGDYLGRGVRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMMALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETLVSNIIMSFIVFLTLQFITPLFKYTPNAILSSIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEAMRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEERVKVDYQTRIQFLIVEMSPVTDIDTSGIHALEELNRSLQKRDVKLVLANPGPVVIDKLHTSNFANLLGEDKIFLTVAEAVAYCSPKLAEDP. 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g02007 658 Gene3D STAS domain 507 654 IPR036513 -
Seca7g02007 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Seca7g02007 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Seca7g02007 658 PANTHER SULFATE TRANSPORTER 41 651 IPR001902 GO:0016020|GO:0055085
Seca7g02007 658 MobiDBLite consensus disorder prediction 1 32 - -
Seca7g02007 658 MobiDBLite consensus disorder prediction 8 22 - -
Seca7g02007 658 FunFam Sulfate transporter 31 507 653 - -
Seca7g02007 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020|GO:0055085
Seca7g02007 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
Seca7g02007 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Seca7g02007 658 Pfam STAS domain 528 646 IPR002645 -
Seca7g02007 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g02007 Seca-Chr7 43364778 43370441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g02007 1 657 Inorganic Solute Cotransporters AT1G22150 76.712 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g02007 K17470 - gmx:100797668 1162.13