Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01985 ATGGCAGCTACAATGGATTTCTACAACAGACAACAACAAGAGCTTCAGTCAGATCCCTTTAGAGGTGGTGAGTTAATGGAAGTTCTAGAAACTTTTATGAAAAGTCCTTCCACAACTCCCTCTCAATCCTTATCCCTTTCTTCAAATTCACACCTACCTTCTACTTCTTATTCCCCTTCTCCTTCTCCTTCTCCTTCTTTCTTCCAACCCCTTCCTTCTTCTTCTCTCCCCCCACAGCCCAATTTCTACACAGAAGGTTGCTCCTCAACGATGACCTACCTATTCCCCTCTGGGTTATCAGATAGCCAAAACTTCATAGGCTTTGAGCAGCAACCACAACCAATTAATAATAATTCTTCTATTCTTGGCCTTAACCACCTAACCCCATCTCAGATGGCCCAGATCCAAGCCCAGATCCAGCTCCAGGCCCACCAAAACAACAACAACACCATGAGCTTCCTTGGGCCCAAGCCCATCCCCATGAAGCAAGTGGGTACCCCTCCAAAGCCCACCAAGCTCTACAGAGGGGTAAGGCAACGGCATTGGGGCAAATGGGTAGCTGAAATCAGACTCCCAAAGAACCGCACAAGGCTTTGGCTTGGAACCTTTGACACTGCAGAAGAAGCTGCTTTGGCTTATGACAGAGCAGCATACAGGCTCAGGGGTGACTTTGCTAGGCTCAATTTCCCAAACCTGAAACACCAAGGTTCATGTGTTGAAGGTGCTTTTGGTGAATACAAGCCTCTGCATTCATCTGTTGATGCAAAGCTTGATGCTATTTGTGAGAATTTGGCTGATATGCAGAAACAAGGGAAGCCAGAGAAAAGTGTGAGGTCTTCTTCTAAGAAGTCTGGTTCAAAACAAGGTTCAAAGGTGGTGGTGGCTACAACAACTCAACCACAGTTGGAGAAGAATACTTGTTGCAAAGTTGAACCTTCTTTGTCTCCTTTGGTGACTGAGAGTGAAGGCTCTGCTGATTCTTCTCCTCTGTCTGATCTTACTTTTGGGGATGTTATTGAGCCACAATGGGAAGCTGGTTCAGAGCATTTTAATCTGCAAAAGTTCCCATCTTATGAGATTGATTGGGATTCTCTGTGA 1098 0.4563 MAATMDFYNRQQQELQSDPFRGGELMEVLETFMKSPSTTPSQSLSLSSNSHLPSTSYSPSPSPSPSFFQPLPSSSLPPQPNFYTEGCSSTMTYLFPSGLSDSQNFIGFEQQPQPINNNSSILGLNHLTPSQMAQIQAQIQLQAHQNNNNTMSFLGPKPIPMKQVGTPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDRAAYRLRGDFARLNFPNLKHQGSCVEGAFGEYKPLHSSVDAKLDAICENLADMQKQGKPEKSVRSSSKKSGSKQGSKVVVATTTQPQLEKNTCCKVEPSLSPLVTESEGSADSSPLSDLTFGDVIEPQWEAGSEHFNLQKFPSYEIDWDSL. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01985 365 FunFam Ethylene-responsive transcription factor 2 172 231 - -
Seca7g01985 365 SUPERFAMILY DNA-binding domain 173 230 IPR016177 GO:0003677
Seca7g01985 365 MobiDBLite consensus disorder prediction 282 296 - -
Seca7g01985 365 Gene3D AP2/ERF domain 173 231 IPR036955 GO:0003700|GO:0006355
Seca7g01985 365 SMART rav1_2 173 236 IPR001471 GO:0003700|GO:0006355
Seca7g01985 365 MobiDBLite consensus disorder prediction 1 73 - -
Seca7g01985 365 MobiDBLite consensus disorder prediction 268 296 - -
Seca7g01985 365 MobiDBLite consensus disorder prediction 32 57 - -
Seca7g01985 365 CDD AP2 172 232 IPR001471 GO:0003700|GO:0006355
Seca7g01985 365 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 365 - -
Seca7g01985 365 PRINTS Ethylene responsive element binding protein signature 196 212 IPR001471 GO:0003700|GO:0006355
Seca7g01985 365 PRINTS Ethylene responsive element binding protein signature 174 185 IPR001471 GO:0003700|GO:0006355
Seca7g01985 365 Pfam AP2 domain 174 222 IPR001471 GO:0003700|GO:0006355
Seca7g01985 365 MobiDBLite consensus disorder prediction 58 73 - -
Seca7g01985 365 MobiDBLite consensus disorder prediction 1 18 - -
Seca7g01985 365 ProSiteProfiles AP2/ERF domain profile. 173 230 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01985 Seca-Chr7 42536637 42537734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01985 1 365 AP2-EREBP Transcription Factor Family AT1G78080 50.000 3.30e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Seca7g01985 AP2 8.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01985 K09286 - gmx:100800478 346.28