Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01981 ATGGCTGAAAATTGGCGTACACCCTCCTTGTCCTTTGCATCAAAGAATAACTCTTTGAAAGGTCTCGCCACTCTCTCTGATAGCTCCCCTATCAAGGTTGGTGCAAGCGAAGGAAACACGATCTCCCTTTCCAACAACAACAATGATGGAGAGTGCTACATCCTCCCTCGTCAAACCAAGGAGATGAAGGACATGACTACACCTTCCAACTACAAGGGACGAAGAGGGAGGCCACCTGGATCTAAGAACAAGCCTAAGCCCCCCATTATAATCAAGGAGGATAGCAATCAATATCTCAAACCAATCGTTATTGAAATCCCTGCTAGGAATGATGTTGTTAAGGCCATCATCGATGTCGCTTATCGACATCATGTCGGCATCACTGTGCTCAGTGGTTCGGGTTATGTCTCCAACGTTACCCTTTGCAACCCTCAATCCCACATTGTTCGTACTTTCTCTATCAATGGACATTTCGAAATTATATCTCTTACAGGAACTTACATGAGTGGTCCCGTTTCCCCACTCTCTCCTTCCAATCGTGCCTTTTCCTCCTTTGCTATTCACCTCTCAAGGCCCCAATGCCAGGTAATTGGTGGAGTTGTTGGAGGGAAGCTTGTGGCTGCAAGTCGTGTGGTTGTTGTGGCTTCAATGTTCAAGAAGCTTGAGTACCACAGGTTGCCCTTCATCAATGGAAGTGTTGAGGAAATTGAAATGGATGACCCCACATATAATGATGTTATTAATGTTGATGTAAGTGGTCCTCGTGATATCACCAACAAAACTGCCATTGTTATTCCGAATGATATGTCTGCTTTCGGTGTTATGAATGAATAG 834 0.4484 MAENWRTPSLSFASKNNSLKGLATLSDSSPIKVGASEGNTISLSNNNNDGECYILPRQTKEMKDMTTPSNYKGRRGRPPGSKNKPKPPIIIKEDSNQYLKPIVIEIPARNDVVKAIIDVAYRHHVGITVLSGSGYVSNVTLCNPQSHIVRTFSINGHFEIISLTGTYMSGPVSPLSPSNRAFSSFAIHLSRPQCQVIGGVVGGKLVAASRVVVVASMFKKLEYHRLPFINGSVEEIEMDDPTYNDVINVDVSGPRDITNKTAIVIPNDMSAFGVMNE. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01981 277 Gene3D - 99 249 - -
Seca7g01981 277 MobiDBLite consensus disorder prediction 1 42 - -
Seca7g01981 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 219 IPR005175 -
Seca7g01981 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 230 IPR014476 GO:0003680
Seca7g01981 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 227 - -
Seca7g01981 277 ProSiteProfiles PPC domain profile profile. 95 239 IPR005175 -
Seca7g01981 277 MobiDBLite consensus disorder prediction 63 87 - -
Seca7g01981 277 CDD DUF296 100 205 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01981 Seca-Chr7 42431512 42432345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01981 75 227 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 44.516 5.28e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01981 - - cam:101509190 142.895