Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01962 ATGGAAGGTGGTTCCATTACCATCAGCTTTCTTAAATCACAATGCAATGAGGAATCAAAGAAGAGCCTAAAAAGAAAACGTGAGAATCAAGACAATGTTGCTAACAAGAATTGCAAGACAAATAACAACAGCAACATTGCTAATGTTAATGATGTTATTCTTGACCAACCGGTTGGATTGCCAATGACATTCCAAGAAAAGATTCAAGAAATGGAAGGCCGTGAGGTGAAGTTGGTGATCCAAAAACAGCTCTTTAAGAGTGATCTGAACTCTAATAATGGAAGGTTCTCCATCCCAATACAACAAATTCGACATGATGCAAGGGATTTCTTGACAGAGACAGATGAATTTTGTTTGAAAGAGCGTAAAGGTGAAGGGAAAAACCAAAGGCTTGTTGGTTTCCCAGTGGCTGTGTTGGATCCAAGTCTTAAACTTTACAACATGTGCTTCAAGAAATGGAAGATGGAACACACAGAGGTGTACAATATAACTAGTGGATGGAACGACCTTTTGAGAAATAATTGTTTGAAAGCCAAAGATACAGTGCAGTTGTGGTCTTTCAGAAGCAACAGTAATCAGTTGTGTTTTGCACTTGTCAAGCTTTAA 606 0.3828 MEGGSITISFLKSQCNEESKKSLKRKRENQDNVANKNCKTNNNSNIANVNDVILDQPVGLPMTFQEKIQEMEGREVKLVIQKQLFKSDLNSNNGRFSIPIQQIRHDARDFLTETDEFCLKERKGEGKNQRLVGFPVAVLDPSLKLYNMCFKKWKMEHTEVYNITSGWNDLLRNNCLKAKDTVQLWSFRSNSNQLCFALVKL. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01962 201 SUPERFAMILY DNA-binding pseudobarrel domain 79 196 IPR015300 -
Seca7g01962 201 Pfam B3 domain-containing protein At2g31720-like 66 171 IPR005508 GO:0003677
Seca7g01962 201 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 14 201 IPR005508 GO:0003677
Seca7g01962 201 Gene3D - 63 200 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01962 Seca-Chr7 41916638 41917243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01962 64 198 B3 DNA Binding Superfamily AT1G05930 27.206 1.28e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01962 - - gmx:102667627 160.999