Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01955 ATGCATAGCTTGGACTCATCAACACGGCTTGGTGGCGTTTCTCTTCAAAAAGCGAACAGAGGAAGAAAGAAGCAGAAAATCAGAGGGATTCGTAGGAGTCCATGGGGTAAGTTTGTAGCAGAGATTCGTGACCCTACAAGAAAAGGTATAGAACATCGGGAGTTGCATAATGTATATGGATATTACTTCCACATGGCAACAAACATCGGAAGGGGCCTAAAGCAAGGGCTTAAGCAGCCTTACCCTTGGACCGACCCTGAGTTAGAGAAGCTGGTGAAGGGAAAGGTAGGCCATTTGTTTTGTCGAAAGCATTATTTGATGGAAGTCGATGGTATGGAGCAGCAAACCTATATGTCATTGTGTAAATTGATGTCCAATATAAGGTGTACTGAGATCGAAGTGTACTACAGCTTGAACATAATACAAGGCCAAAGGTATTTCCCTTCCACTTTTCTTATTTTAATTATGAGTGATAGTGAGTCTTTACAAATTTTTCTTGGTAAACCCGATTCCTGGGTGTCTCGGAGTCGGTCGTCTTGGGGGGATAACAATGATGATTTTGGTCTGGCTGTGAATGAAATTCTGAGGAGGCGTAATATAACCGTAACCAGTCGAAGGACCGGGGTTGTGAGGAGTGAAGAGATACAGTCTAGTAGTAATTTTGAGACGTCCGAGTCTGATTCAGGCAGTTGTTATACTGCCTCTACAGGTGAAGAGATGGCTCAGTCAAGAAATGTAGATTACTTCATGCCTGCGTGGGCTGATAGATATAACTGGGTGGATCCAGAGGTTCTTGAGATTCCAAGTATTTATAGACCCGACTGCCCAGAACAATATAAGGAGCGACTGTACGAGTTGGATGTTTTTAAGACAGCTGAGATGCGGGAAAATTATCGTGTCGTTGTACCTTCCCCTGGGAGCTGGGTGTTAGATTATCTCACTTGTGCTCCCTCACAGTTGCATCCGAAGGAGAAGAAGTCGGAGACTCTGAAGAGTTGGGTATCATTGAGGGGGTTCAGTGATAGGAAAATATTGACCCCCTACGCAGAGTCGGCTAAAAGGGGGAGTATTTCTTTTAAGCAGGAATTTTTTCAAGTTCAAGCCAATAAAGAGGTGAAGCCCTTTTGGGAGGAGGAGTCGTCCAATACTCCCAAGTTTCACATTTACTGGACCAGCCGACATTACGACAAGAAGTCAGCCGATTTTGAAGTGGTCAAGTCGGCGCTATCCCCACAAGACCGGGCCATTAGGAAGTTATTGAGGAATTCGGTCAAGGAATATGGGTTATTTTCTAGTAAGAGAATACTAGATGGTCCGACTCGTAGCACGGGTTCTAGAATTGGTAATAATGATGACATCCAGGTAGACATGGATTTCACCCGGACTGATGGTGGGGATGGCTTGGGAACCCAACCCGTCGTTAATGTTGATCTCGTCCCTACTGGGCCTGAAGGTGGGAACGAAGAACAACCTCAAGTGCAGAAAAAGAAAATCTTGAGGAAAAAGAAAAATAAGAGAGCCAGGGTCGACGAGTCTTCAGAAGAGTTCGGGTTGAATTTGTATGACTCGGAGATCGACTTGGATACTCCTGAGATGGATCATATTCTCTACAATCCTTTTATGAAGTCGGTCCATGAGAGCGTCCCTAAAATAGAGGGCTTGATGGACATCGAGTGCCAATGCCTTCAACATGCGGCGTATATAAGGTATTTGAGGCTTGATGTCATCCCGGTGTCTGAGCAGACCTCGTCTGACCTGGAAACCCGTACGACTGAGAGGGATACGACGTTGGCTGATCTCAAAGCTGCGCAGGAGGCGTTGGAACTTGAGAAAAAGGACAAGTTGAGGTACAAGGGGAGTCTCAAGTCGGCCAAAGGGAAGAATAAAGCTTATGAGCAAGAAATTGAAAAGCTCAAGGCTGACTTGGAGAAATTGCGGCTGAATCCTCCTGCAACCGAGGTGACTGAGGCTGCGGTGTCCGATTTGCTGAAGAAGAATTTGCAGAAGGCTCAAGCTAAGTTCAACGAAGAGGGAACTCGCTTAGTGAAGCTTTCTGAGCAAATCAGTGCCGCTTCTTTTGGGAATGTCGTGGCACAGCTGGGGATCCTCAATCCCGATTTGAAGGTTGAAGGATCTTCGGCCGAGTATGAGGTTTTCCAAGGGAGGATCTGCCGGGTCGACATGGAAAAGAAGGTTTTTGTTGATGTAGCCTCCGGGGAAGAAGTCGGCCCGTATGAAGAGTGA 2244 0.4617 MHSLDSSTRLGGVSLQKANRGRKKQKIRGIRRSPWGKFVAEIRDPTRKGIEHRELHNVYGYYFHMATNIGRGLKQGLKQPYPWTDPELEKLVKGKVGHLFCRKHYLMEVDGMEQQTYMSLCKLMSNIRCTEIEVYYSLNIIQGQRYFPSTFLILIMSDSESLQIFLGKPDSWVSRSRSSWGDNNDDFGLAVNEILRRRNITVTSRRTGVVRSEEIQSSSNFETSESDSGSCYTASTGEEMAQSRNVDYFMPAWADRYNWVDPEVLEIPSIYRPDCPEQYKERLYELDVFKTAEMRENYRVVVPSPGSWVLDYLTCAPSQLHPKEKKSETLKSWVSLRGFSDRKILTPYAESAKRGSISFKQEFFQVQANKEVKPFWEEESSNTPKFHIYWTSRHYDKKSADFEVVKSALSPQDRAIRKLLRNSVKEYGLFSSKRILDGPTRSTGSRIGNNDDIQVDMDFTRTDGGDGLGTQPVVNVDLVPTGPEGGNEEQPQVQKKKILRKKKNKRARVDESSEEFGLNLYDSEIDLDTPEMDHILYNPFMKSVHESVPKIEGLMDIECQCLQHAAYIRYLRLDVIPVSEQTSSDLETRTTERDTTLADLKAAQEALELEKKDKLRYKGSLKSAKGKNKAYEQEIEKLKADLEKLRLNPPATEVTEAAVSDLLKKNLQKAQAKFNEEGTRLVKLSEQISAASFGNVVAQLGILNPDLKVEGSSAEYEVFQGRICRVDMEKKVFVDVASGEEVGPYEE. 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01955 747 Coils Coil 495 515 - -
Seca7g01955 747 MobiDBLite consensus disorder prediction 214 233 - -
Seca7g01955 747 Coils Coil 621 648 - -
Seca7g01955 747 Coils Coil 667 687 - -
Seca7g01955 747 ProSiteProfiles AP2/ERF domain profile. 26 62 IPR001471 GO:0003700|GO:0006355
Seca7g01955 747 MobiDBLite consensus disorder prediction 481 506 - -
Seca7g01955 747 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01955 Seca-Chr7 41824291 41828791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01955 23 49 AP2-EREBP Transcription Factor Family AT3G23230 66.667 5.50e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01955 - K09286 lja:Lj0g3v0060649.1 67.781