Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01950 ATGATCGAGGCAAAGGATCCCTTTGAGAAGGTTGTGCTAGATGGTAGACAGCTGGCTCTGAAGATTAGTGCAAATTCTGTATATGGGGTTACAGGGGCTATTATTGGTCAATTACCATGCTTAGACATATCATCCAATGTAACATATCCTTCCTGGTGTACTTGGCTCCGCTGCCAACTTTTTACTGAATATACAAAAAGAAATGAACAGAAGCTTCCAATCTTTTCGGCAGACAAAGGCGTAGCGTGGCGTGACGGTGATCAGTGA 267 0.4345 MIEAKDPFEKVVLDGRQLALKISANSVYGVTGAIIGQLPCLDISSNVTYPSWCTWLRCQLFTEYTKRNEQKLPIFSADKGVAWRDGDQ. 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01950 88 SUPERFAMILY DNA/RNA polymerases 4 49 IPR043502 -
Seca7g01950 88 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 3 49 - -
Seca7g01950 88 Gene3D Palm domain of DNA polymerase 1 51 IPR023211 -
Seca7g01950 88 Pfam DNA polymerase family B 2 49 IPR006134 GO:0000166|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01950 Seca-Chr7 41717557 41720130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01950 3 48 Core DNA Replication Machinery Family AT5G63960 84.783 7.68e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01950 K02327 - mus:103977078 83.5741