Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01936 ATGAATCCTGCAAGGAGTTTAGGCCCTGCCATTGTATCTGGTGATTACAAAAACATTTGGGTTTTCATCATAGGTCCTACTCTGGGAGCAGTCTCTGCAACTATTCTTTACACATTTTTAAGAGTAGCCAAGCCAACTAAACCTGAACCATGTCACATGTGCAGTCATAATCATTTCACTTTTTGA 186 0.3978 MNPARSLGPAIVSGDYKNIWVFIIGPTLGAVSATILYTFLRVAKPTKPEPCHMCSHNHFTF. 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01936 61 Gene3D Glycerol uptake facilitator protein. 1 49 IPR023271 -
Seca7g01936 61 Pfam Major intrinsic protein 1 37 IPR000425 GO:0015267|GO:0016020|GO:0055085
Seca7g01936 61 PANTHER AQUAPORIN NIP2-1 1 44 IPR034294 -
Seca7g01936 61 SUPERFAMILY Aquaporin-like 1 49 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01936 Seca-Chr7 41297145 41297330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01936 1 41 Major Intrinsic Protein MIP AT5G37810 60.976 2.87e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01936 K09874 - lja:Lj0g3v0011459.1 110.923