Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01915 ATGAATCAAAACAATCTTCAGCCTCTACCTCTGCTAAGCAGTTTCCTTGGTTCAGCTTCCCAGGAATCTTTACTACTAAACCAAAATCCTAAAGCATGCTATAGCCAAGCAGAGGATGTCACAGTGGCCTTACACATAGGCCTCCCTGACAATTCCAATGGCTCCCCCAATAATAACAATGGATTTGTTAATGCCCCAAGTCATGTTCCTAACAATTACTGGATACCAACTCAAGAACAAATCCTCATTGGATTCAGTCATTTCTCTTGCCCTGTTTGCTTCAAAACCTTCAACCGCTACAACAACCTTCAGGTGATGCATATGTGGGGACATGGGTCACAGTATCGTAGAGGACCAGACTCACTGAAACGAACTCATCCACGGCCCTTATTAGACATTCCATGCTATTGTTGCTCAAAGGGATGCAAGAACAACATTGAACACCCAAGAGCTAAGCCTCTGAAGGATTTCCGAACTTTGCAGACACACTACAAGAGAAAGCACGGGGCAAAGCCCTTTATGTGTCGCAAGTGTGGGAAGTCCTTGGCAGTGAAGGGTGATTGGCGAACCCATGAGAAAAACTGTGGCAAACGCTGGCTCTGTATTTGCGGTTCGGACTTCAAACATAAGAGGTCGCTTAAAGACCATATCAAAGCATTTGGCTTTGGACATAGCCCTTTTTCTTCTTCTTCTGAGGGCATGTAA 705 0.4482 MNQNNLQPLPLLSSFLGSASQESLLLNQNPKACYSQAEDVTVALHIGLPDNSNGSPNNNNGFVNAPSHVPNNYWIPTQEQILIGFSHFSCPVCFKTFNRYNNLQVMHMWGHGSQYRRGPDSLKRTHPRPLLDIPCYCCSKGCKNNIEHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCGKSLAVKGDWRTHEKNCGKRWLCICGSDFKHKRSLKDHIKAFGFGHSPFSSSSEGM. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01915 234 Gene3D Classic Zinc Finger 169 225 - -
Seca7g01915 234 FunFam Zinc finger protein WIP2 142 224 - -
Seca7g01915 234 SUPERFAMILY beta-beta-alpha zinc fingers 158 193 IPR036236 -
Seca7g01915 234 PANTHER ZINC FINGER PROTEIN WIP2 9 228 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01915 Seca-Chr7 40912550 40914578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01915 1 229 C2H2 Transcription Factor Family AT1G34790 58.755 1.48e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca7g01915 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01915 - - gmx:547675 384.03