Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01884 ATGGCGGCCACTCCTTCCTCGCGCGAAGAGTTCGTGTACATGGCGAAGCTGGCGGAGCAAGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCACCACCGTAGATAACGAGGAACTCACGGTGGAGGAGAGGAACCTGCTCTCCGTCGCCTACAAGAACGTGATCGGCGCACGACGCGCTTCCTGGCGCATCATCTCCTCCATCGAGCAGAAGGAGGAGAGCAGGGGAAACGAAGACCACGTCTCCGTCATCCGTGACTACCGATCCAAGATCGAAGGTGAGCTCTCCAACATCTGTGATGGAATCCTCAAGCTCCTTGACTCACGCCTCATCCCCTCCGCTTCCTCCGGCGACTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGAAAAGATGCCGCCGAGAGCACCCTCTCCGCTTACAAATCCGCTCAGGTAGACATTGCGAATGCTGAGCTGCCTCCAACTCACCCAATCAGGCTGGGTCTTGCACTGAACTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATAGGGCTTGCAACCTTGCAAAACAGGCTTTCGATGAGGCAATTGCTGAATTGGATACATTGGGAGAGGAATCATACAAGGACAGCACCTTGATTATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGACGGAGCAGATGAGATTAAAGAAGCTGCACCTAAAAATGATGAACAGCAGTAG 786 0.5331 MAATPSSREEFVYMAKLAEQAERYEEMVEFMEKVSTTVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIEGELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKDAAESTLSAYKSAQVDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKNDEQQ. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01884 261 SUPERFAMILY 14-3-3 protein 7 241 IPR036815 -
Seca7g01884 261 Gene3D - 1 252 IPR036815 -
Seca7g01884 261 FunFam 14-3-3 protein epsilon 3 252 - -
Seca7g01884 261 PIRSF 14-3-3 2 251 IPR000308 -
Seca7g01884 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 -
Seca7g01884 261 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Seca7g01884 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Seca7g01884 261 Pfam 14-3-3 protein 14 239 IPR023410 -
Seca7g01884 261 Coils Coil 14 34 - -
Seca7g01884 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Seca7g01884 261 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Seca7g01884 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Seca7g01884 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Seca7g01884 261 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Seca7g01884 261 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Seca7g01884 261 SMART 1433_4 8 252 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01884 Seca-Chr7 39800624 39803063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01884 6 261 14-3-3 family AT1G78300 91.051 5.01e-172 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01884 K06630 - gmx:100529128 481.87