Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01836 ATGGAATCTATTGAAGAAAACCACGAGCATACTGGTCATGAGATTGATAATAATGATACGAATGTTGGTGGTTTTGAAGCTAATGGTGGTCAAGAACCTTACATTGGAATGGAATTCGAATCACAGGAAAATGCTCATTTATTCTACATGTGTTATGCTAAACGGATTGGATTTGGTGTGTCAATTAAGACTAGTCGTCGTTCAAAAATTGATAGGCAATTTATTGCTGTAAAGTATGCTTGCACAAGATATGGGAAGAAGCGAGAATCCACTGCACGTAATCCACGCCCTTGTTTGAAGGTGGATTGTGAGGCTAGCTTATGCATTAAAAGAAGTTGTGGTGGAAAATGGGTTGTCCACGACTTCATCAAAGACCACAATCATGAGCTTTTTCCATCATATGCACACTATTTTCCTTGCCATAGAGGCATCAATCAAGCTCAAAAGCATTGTATTGAAACTTTGCAACATGTCGGAGTGAGAACAAGCAAAATTTATGCTACAATGGCCAAACAATATGGAGGTTATGAAAACATTGGCTGCTTAGAGAAAGATATTAGAAATCATTTGGACAAGGATCGTCATTTGGCTTTAGAATCAGGAGATGCAAATGCAATGTTGGAGTGTTTTATGCTTATGCAAGAAGAAAATCCAAGATTTTTTTATGCAATTGATTTAGACGATGAAGGTCGTGTGAAAAATATATTTTGGGTGGATGCAAAAGGTAGAGATGATTATCAAGAGTTTGGAGATGTAATTTCCTTTGATACAACATATATCACAAATAAGTATAAAATGCCATTTGCTCCTTTCATTGGCGTGAACAATCACTTCCAGTCAAGGCTACTTGGTTGTGCATTACTAGCAGACGAGTCTTCAAAAACTTTCTCATGGTTGATGAAAACGTGGCTTAGAGCTATGGGTGGAAAGCCTCCAAATGCAATAATAACTGATCAAGATAGAGCAATGAAAGTAGCTATTCAAGAGGTATTTCCAAATGCTCGACATCGGTTTTGTCTTTGGCACATACTAAGAAAAGTACCTGAAAATCTTAGCCATGTATTAAGAAAACATGAAGATTTCATGACCTATCTCAACAAATGCATTTACAAGTCTTGGTCAAAGCAGCAATTTGAAGATAAATGGCAAGAAATGGTCGAGAATTTTCAGTTGGTGGAGGATGAATGGATTCAGTCTTTATATGAAGAACGTGAACATTGGATTCCTGTTTACATGAAAGATACATTTTTTGGTGGCATGTCAACAACTCAAAGATCAGAGAGCATCAACTCATTTTTCGATAAATATGTAAGAAAGAAAACTACATTGAAGGAATTTGTTGAAAAATATAAAGTTGCTTTACAAGATAGAGAAGAAGTGGAAATGCAAGCTGATTTTAATACATGGCACAAGCAACCTATTCTTAAGACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACACATGAAGTCTTCAAGAAATTCCAATTTGAAGTTTTAGGATTGTCTGGATGTCATCTTGTAGAAAAGAATGAAGATGCTCAGATTTTCTCTTTTAAAATTATGGACTTTCAAAGAAATGAAGACTTTTTGGTAGAGTGGGATGCATCAAAGGAGGAAATATCTTGCATGTGTCGCTTATTTGAGTATAATGGATATCTTTGTAGACACTCATTGATGGCAATCCAGGCTGTTGGTGTTTTTGCTGTCCCATCACGCTATATACTGAGAAGATGGACAAAGGATATTAGAAGTAAGCATCATAAAAAAGACATGAATGAAGATGTTTGCTCCAATAAGAAGAGATATGATCTCTTATATAAAAAGGCCATTGAATTGCTTGAGGAAGCATCATTAACTAATGAGAGTTGCAAGGTTGCTTGTAATGCACTTGAAGAGAGCTTGAAGCAATGTTCAAGCATTAACCATTCTTTGAAAACTGACAAAGAAAATGTTTGTAAGGACATTTTACATGACAAATCACTTCTTGATCCTCAAGTGTCAAAAACAAAAGGGGCTCCAAGAAGAATAAAAAGTGGGGTTGAGAAAGGTCGTAAAAGAACATACGATGGTAAAGTGAAAAAGTTTGAACTTGTTCAAAAAGAAGCAATGAATACATTTGATGTTCACAATGTTGAAGTGGTGACTGCAGCAACAAGAATGGAAAAGCAATAG 2181 0.3576 MESIEENHEHTGHEIDNNDTNVGGFEANGGQEPYIGMEFESQENAHLFYMCYAKRIGFGVSIKTSRRSKIDRQFIAVKYACTRYGKKRESTARNPRPCLKVDCEASLCIKRSCGGKWVVHDFIKDHNHELFPSYAHYFPCHRGINQAQKHCIETLQHVGVRTSKIYATMAKQYGGYENIGCLEKDIRNHLDKDRHLALESGDANAMLECFMLMQEENPRFFYAIDLDDEGRVKNIFWVDAKGRDDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLADESSKTFSWLMKTWLRAMGGKPPNAIITDQDRAMKVAIQEVFPNARHRFCLWHILRKVPENLSHVLRKHEDFMTYLNKCIYKSWSKQQFEDKWQEMVENFQLVEDEWIQSLYEEREHWIPVYMKDTFFGGMSTTQRSESINSFFDKYVRKKTTLKEFVEKYKVALQDREEVEMQADFNTWHKQPILKTPSPFEKQMSMIYTHEVFKKFQFEVLGLSGCHLVEKNEDAQIFSFKIMDFQRNEDFLVEWDASKEEISCMCRLFEYNGYLCRHSLMAIQAVGVFAVPSRYILRRWTKDIRSKHHKKDMNEDVCSNKKRYDLLYKKAIELLEEASLTNESCKVACNALEESLKQCSSINHSLKTDKENVCKDILHDKSLLDPQVSKTKGAPRRIKSGVEKGRKRTYDGKVKKFELVQKEAMNTFDVHNVEVVTAATRMEKQ. 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01836 726 Coils Coil 443 463 - -
Seca7g01836 726 Pfam MULE transposase domain 252 345 IPR018289 -
Seca7g01836 726 MobiDBLite consensus disorder prediction 1 27 - -
Seca7g01836 726 Pfam FAR1 DNA-binding domain 48 132 IPR004330 -
Seca7g01836 726 MobiDBLite consensus disorder prediction 1 16 - -
Seca7g01836 726 ProSiteProfiles Zinc finger SWIM-type profile. 532 568 IPR007527 GO:0008270
Seca7g01836 726 SMART 26again6 543 570 IPR006564 GO:0008270
Seca7g01836 726 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 641 IPR031052 GO:0006355
Seca7g01836 726 Pfam SWIM zinc finger 534 567 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01836 Seca-Chr7 37559825 37563004 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g01836 MULE 4.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01836 - - mtr:112418473 1145.18