Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01824 ATGGGCTATCTCTCCTGCAACGCCGAGTCTGCAATTGCCACGTGTGATCCCCACTACAAGAAAAAAAACACCAACCCCAAAACTCTCAAATACTATTCCCAACCCAAAGTCAGAGAGTTCTCTTACTCGGAACTCCTCGCCGCCACTAACGGCTTCTCCTCCGACACCTTCTTAGGCAAAGGCAGCCACGGCAGCGTCTACAAAGCCACCCTCGACGGCGGCAGCCTCATCGCCGCCGTCAAGAGTACAAAACGCCACCACACCGCCGCAGACAACGAGATCGAGATCCTCTCTCGCGTCGCAAACCCTCGCCGCTTCGTCAACCTCATTGGCTTCTCCACTGACCACGCCATCAACAACAACAACAAGCTAATAGTCGTTGAATACATGCCTAACGGCTCGCTCTACGACCTCCTTCACTCGAACCCGGTTCGGCCGCCCGGTTGGACTCAACGCGTCCGGTTCGCGCTACAAATCGCGAAGGCGGTTCACGCACTTCATTCTCTGGACCCGCCGGTGATCCACCGCGACATCAAATCCTCCAACGTTCTCATCGACGATCGCTGGAACGCGAGGCTTGGCGATTTCGGTCTTGCACTCAGGGGACACGTGGAGGACGCTCGCGTGAAATGTACTCCACCGGCTGGAACGCTAGGTTACCTTGACCCGTGCTATCTTGCGCCGGCAGACCTCACCGATAAGAGCGATGTTTACAGCTTTGGGATCTTGCTGCTCGAGATAATCAGTGGCCGGAACGCTATCGACGTGAGCTACAGTCCGCCGTCGGTGTTGGACTGGGCGGTGCCGTTGATAAGGCGAGGCGAGGTCGCCGGAATCTGTGACCCGAGGATTGGTTCGCCGCTGGATGAGGCAGCGATACGGAAGTTAGCGGTGCTTGCGGCGAGGTGCGTGAGGTCGACGGCGGAGAAGCGGCCTTCGATGGCGGAGGTTGTGGAGTGCGTTAAGGCGGTGAGGAAGAGAATTCACGCGCCGGCGATATGGAACAGAATGAAGAGACGCGTGGAAGCGCGTGGGAGACCGTTGGTTATTGATTGTGACAGGAGTGAAGAATTTGTGAGGGTAGTTAAGGGTGGGAGCAGGAGGAACGGGAAAGTATCCAGTGTGTCGGGTGCAGAGAATGGGAATGTTCCCGCGAATCGAACGGTTAGGTCTAGATCCATTGGTTCTGGTTTTTTTAGAGAGATCAAAATTAAATCGGGTTCGGATCCGAACCAGACTGGGTCCGGGTTTGGGAGTAGGAAAGGGAAAATGGTGGTAACGAGGCTCAACAGATCAAGGTCTATGGGGTTTTTGCAAACTGCACGTCTTTTACATTATGGTAATGAGAATGTAATTGCGAATGTGAAGCCAAATATGTGTCATCAGAAACAAAACGATAATAATGACCCGATTCGTTCGACGGAGAAGGCATTGTCCAAGCTGGTCATTATGGATAAGAAGTTGGAACAGAAAATACAGGAAAAACCATTGGTTTATTTATTCACATCGTGTGGAGAATCAAAGTAA 1527 0.5305 MGYLSCNAESAIATCDPHYKKKNTNPKTLKYYSQPKVREFSYSELLAATNGFSSDTFLGKGSHGSVYKATLDGGSLIAAVKSTKRHHTAADNEIEILSRVANPRRFVNLIGFSTDHAINNNNKLIVVEYMPNGSLYDLLHSNPVRPPGWTQRVRFALQIAKAVHALHSLDPPVIHRDIKSSNVLIDDRWNARLGDFGLALRGHVEDARVKCTPPAGTLGYLDPCYLAPADLTDKSDVYSFGILLLEIISGRNAIDVSYSPPSVLDWAVPLIRRGEVAGICDPRIGSPLDEAAIRKLAVLAARCVRSTAEKRPSMAEVVECVKAVRKRIHAPAIWNRMKRRVEARGRPLVIDCDRSEEFVRVVKGGSRRNGKVSSVSGAENGNVPANRTVRSRSIGSGFFREIKIKSGSDPNQTGSGFGSRKGKMVVTRLNRSRSMGFLQTARLLHYGNENVIANVKPNMCHQKQNDNNDPIRSTEKALSKLVIMDKKLEQKIQEKPLVYLFTSCGESK. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01824 508 Gene3D Transferase(Phosphotransferase) domain 1 130 340 - -
Seca7g01824 508 FunFam Serine/threonine-protein kinase-like protein 130 334 - -
Seca7g01824 508 Pfam Protein tyrosine and serine/threonine kinase 56 320 IPR001245 GO:0004672|GO:0006468
Seca7g01824 508 SMART serkin_6 52 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01824 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Seca7g01824 508 PANTHER OS01G0253100 PROTEIN 25 324 - -
Seca7g01824 508 SUPERFAMILY Protein kinase-like (PK-like) 36 322 IPR011009 -
Seca7g01824 508 ProSiteProfiles Protein kinase domain profile. 52 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01824 508 Gene3D Phosphorylase Kinase; domain 1 12 129 - -
Seca7g01824 508 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01824 Seca-Chr7 37032544 37034070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01824 6 318 Receptor kinase-like Gene Family AT3G59420 39.198 9.95e-65 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Seca7g01824 PK_Tyr_Ser-Thr 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01824 - - zju:107411142 550.051