Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01815 ATGGCACCCAGTTTTGATTGTGTTTCAAGCCTTCTCTGTGCTGAAGACAACAGCATTTTTGATGAAAACGATTTTGGGGGTTCGATGGAGATGTTGGAGGAAACATGGAATCCTAGATATAATGGAAACTATAATCAAAGACAACAGCACTATGGTGACCCAAATGGGTGGTTGCCATTGCAGAGTGATGAATGTTTGGCTCTTATGGTGGAAAAGGAATGTCACCACTTGCCTGGTGGTGATTATGTGAATAGGCTGAGAAGTGGGGATTTGGATTTTGGGGCTAGAAATGAGGCCATTGATTGGATTGAAAAGGTCAGAGAGCATTTTGGTTTTGGACCTCTCAGTACATATCTATCCATAAACTACTTGGACCGATTCCTTTCTGCATATGAATCACCACTCCACTCTCAGAAGCAAAGACCTTGGACAATGCAATTGCTGGCTGTGGCATGCTTATCTCTTGCAGCCAAAGTAGATGAGACTGAAGTTCCTCTGTCTCTTGATTTGCAGGTGGGTGAATCTAAGTTTTTATTTGAAGCTAAAACAATACAAAAAATGGAGCTTCTTGTACTGAGCACATTGAAATGGAGAATGCAAGCAATTACTCCATTTTCCTTCATTGACTATTTCCTTTTGAAGATCAATGATGATCAAAGTGCAATAGGGGCTTCAACTTTTCAATCTGTCCAACTTATACTGAGTACTGTAAGAGGAATTGACTTCTTGGAGTTCAGACCATCAGAGATTGCAGCAGCAGTGGCAATATCTGTGGTGGGGGAAACCCAAACAGTTCTTACTGAGAAAGCAATTTCTGTTCTGATTCACCATGTAGAAAAGGAGAGAGTATTGAAGTGTGTTAAAATGATGAATGAGCTGTCATCAGGTAGTGGTTCTGCTAAGGATACTAGTGCTTCTGTTCCTCCTGTCCTTTGTGTGCCCCAAAGCCCAATAGGGGTGTTGGACACTGTGTGCTTAAGCTACAAAAGTGATGACACAAATGTTGGTTCATGTGCAAATTCTTCACTCAATAGTCCAGATGCTAAAAGGAGGAAGCTAAAATAA 1065 0.4122 MAPSFDCVSSLLCAEDNSIFDENDFGGSMEMLEETWNPRYNGNYNQRQQHYGDPNGWLPLQSDECLALMVEKECHHLPGGDYVNRLRSGDLDFGARNEAIDWIEKVREHFGFGPLSTYLSINYLDRFLSAYESPLHSQKQRPWTMQLLAVACLSLAAKVDETEVPLSLDLQVGESKFLFEAKTIQKMELLVLSTLKWRMQAITPFSFIDYFLLKINDDQSAIGASTFQSVQLILSTVRGIDFLEFRPSEIAAAVAISVVGETQTVLTEKAISVLIHHVEKERVLKCVKMMNELSSGSGSAKDTSASVPPVLCVPQSPIGVLDTVCLSYKSDDTNVGSCANSSLNSPDAKRRKLK. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01815 354 CDD CYCLIN_AtCycD-like_rpt1 95 197 - -
Seca7g01815 354 FunFam D6-type cyclin 196 288 - -
Seca7g01815 354 SUPERFAMILY Cyclin-like 184 294 IPR036915 -
Seca7g01815 354 Gene3D - 68 288 - -
Seca7g01815 354 SMART cyclin_7 101 193 IPR013763 -
Seca7g01815 354 SMART Cyclin_C_2 202 319 IPR004367 -
Seca7g01815 354 FunFam D2/4-type cyclin 79 195 - -
Seca7g01815 354 Gene3D - 79 200 - -
Seca7g01815 354 Pfam Cyclin, C-terminal domain 202 301 IPR004367 -
Seca7g01815 354 SUPERFAMILY Cyclin-like 57 199 IPR036915 -
Seca7g01815 354 PANTHER CYCLINS 63 292 IPR039361 -
Seca7g01815 354 CDD CYCLIN_AtCycD-like_rpt2 202 290 - -
Seca7g01815 354 Pfam Cyclin, N-terminal domain 66 199 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01815 Seca-Chr7 36737625 36740270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01815 40 339 Core Cell Cycle Gene Families AT2G22490 47.284 2.45e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01815 K18810 - gmx:100803873 515.768