Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01814 ATGATGTGGGAATGGGAAGATGAATTGAACGACGATTCCACCTCTACACCCCAACAAGAACAACCTTACCCTGATTCCTATCTCAATTTCGATTTCTTCTCTGCTCTCTCCAAGCCCAAGGATTATTACAAGATATTGGAAGTGGATTATGATGCTACTGAAGATGCTATTCGCTCCAATTACATTCGTCTTGCTCTGAAATGGCACCCGGATAAGCAAAAGGACCAAGATTCCGCTACTTCACGGTTTCAAGAGATAAACGAGGCTTATCAGGCCAGTAGGAGTATTTGTTGA 294 0.4286 MMWEWEDELNDDSTSTPQQEQPYPDSYLNFDFFSALSKPKDYYKILEVDYDATEDAIRSNYIRLALKWHPDKQKDQDSATSRFQEINEAYQASRSIC. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01814 97 ProSiteProfiles dnaJ domain profile. 41 97 IPR001623 -
Seca7g01814 97 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 91 - -
Seca7g01814 97 PRINTS DnaJ domain signature 43 61 IPR001623 -
Seca7g01814 97 PRINTS DnaJ domain signature 61 76 IPR001623 -
Seca7g01814 97 PRINTS DnaJ domain signature 78 97 IPR001623 -
Seca7g01814 97 Pfam DnaJ domain 41 91 IPR001623 -
Seca7g01814 97 SUPERFAMILY Chaperone J-domain 33 91 IPR036869 -
Seca7g01814 97 CDD DnaJ 41 91 IPR001623 -
Seca7g01814 97 Gene3D DnaJ domain 12 95 IPR036869 -
Seca7g01814 97 SMART dnaj_3 40 95 IPR001623 -
Seca7g01814 97 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01814 Seca-Chr7 36697015 36701123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01814 34 92 C2H2 Transcription Factor Family AT1G74250 37.500 2.15e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01814 - - var:108338470 148.288