Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01803 ATGGATACAAACTTGACTCTAAAAGTTGGTCTTGAATTCGATAATTTAGAAGATGCATGGAAATTTTGGGTAAAATACGGAGGCATAAAAGGCTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTCTATTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGAAGACCAGACTCAAGGGATTATAAAACGACCAATCCAAAACCTGAGACAAGAACGGGGTGTACGACTAAAATGAAAGTCAAACGATTCAACGAAAAATACAGAGTGATTAATTTTGTTGATGATCATAATCACCCACTGCAACCACCAGAAACAGTGCATATGTTAGCTTCTCAACGAAGAATAACTGAACATCAAGCATATGAACTTGAAGTGGCAGAAGACGCAGGGATTCAACAGAAAGCCTCATTTGATTTGATGAGTAAATATGTAGGAGGTAGAGAGAATCTAGGGTATACTAGACAAGATGCAAAGAATTATTTGAATTCGAGGAGGCGGCGAGATATGGCTTATGGTGAAGCTGGGTATTTGCTACGATATTTCCAACAACAATTGATAGATAATTCTTCATTCTTCCATGCATACCAAATGGATTTGGAAGAGCAAATAACAAATGTATTTTGGGCCGATGCAGGAATGTTGTTTGACTATCATTGCTTTGGTGATGTCATTTCTTTGGATACCACATATTGTACAAATGGAGATCATCGACCCCTTGCAATTTTCTCGGGATTCAACCATTATAGAGGAGGGGTGATCTTTGGGGCAGCTTTACTATATGATGAGACTACAGACTCGTTCAAATGGCTTTTGGAAACATTTTTGTAG 849 0.3769 MDTNLTLKVGLEFDNLEDAWKFWVKYGGIKGFGVRKQYSSKSKKDGSITSYLYVCCKEGVRRPDSRDYKTTNPKPETRTGCTTKMKVKRFNEKYRVINFVDDHNHPLQPPETVHMLASQRRITEHQAYELEVAEDAGIQQKASFDLMSKYVGGRENLGYTRQDAKNYLNSRRRRDMAYGEAGYLLRYFQQQLIDNSSFFHAYQMDLEEQITNVFWADAGMLFDYHCFGDVISLDTTYCTNGDHRPLAIFSGFNHYRGGVIFGAALLYDETTDSFKWLLETFL. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01803 282 Pfam MULE transposase domain 230 279 IPR018289 -
Seca7g01803 282 PANTHER OS01G0519700 PROTEIN 4 282 - -
Seca7g01803 282 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01803 Seca-Chr7 36523598 36524446 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g01803 FAR1 4.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01803 - - vun:114184605 486.493