Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01790 ATGCAAGATGATTGTTTTGAAGATGTCATTATGATAGATGATTTTAAGGATATTAAGAAGATTGATATGAAAAATATCAGTGAAGATGATGTTTGTAAATATGAATTTGCCGATCTAAATGTGGCCCACGAATTCTACAGTTGGTATGGTAGGTCGAATAGGTTCTATGTTCGTAAGAGCAATGTAGTACCAAACAGTAAGGGTGACATTTTGCAGCAAACATTTGTTTGTTTTGCACAAGGATTTAGAAGGGCTAGCCGCTCCACAAGAAGTTCTAAAAAGAGAAAACTGAGATCGAAAATGATGTTTGATTGTAAAGCAGTGTTCCATATTCACATCAATATTAACTCAGACTGA 357 0.3445 MQDDCFEDVIMIDDFKDIKKIDMKNISEDDVCKYEFADLNVAHEFYSWYGRSNRFYVRKSNVVPNSKGDILQQTFVCFAQGFRRASRSTRSSKKRKLRSKMMFDCKAVFHIHININSD. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01790 118 Pfam FAR1 DNA-binding domain 44 114 IPR004330 -
Seca7g01790 118 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01790 Seca-Chr7 35982484 35982840 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g01790 FAR1 3.9e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01790 - K24576 tpra:123886262 102.449