Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01784 ATGCTTCCTTTTCGAAGATTCTACGGGTTCGAGAGCTGGCTTGATCATGAGTCAGGGCACGTTCAGAGCTCGTTGATCAAGGCAGTGGAATTGAACGGTGGGAGATCGAAAGGGGAGAGGAAATCAACGGAAGCATGCAAGAGTCACAGGGAAGCTGAGAGGAGACGCAGACAGCGAATCAACGCCCACCTCTCCACACTACGCTCTCTCCTCCCTAACGCCGCCAAGTCAGACAAGGCGTCGTTGCTGGCGGAAGTGGTTCAGCACGTGAAACGGTTGAGGAAGGAAGCCGATGACGTGGCCTGCCGTCGTCACGACGGAGACTCGTCGTCTTCCTGCAGTGGCGAGCCCGGTTCGGTTCTTTCTGCGGAGGATGCTGACACGTGGCCGTTTCCTGGGGAGTCTGATGAAGCCACGCTGAGCTATTGCGACGGCGAACCGAAGCGGGTGAAAGCGACGCTGTGCTGTGAGGACCGGCCCGGTTTGAACCAGGACCTGACGCAGGCAATCCGGTCTGTTCGAGCCAAGGTGGTTCGAGCGGAGATGATGACGGTTGGGGGCAGGACCAAGAGTGTGGTGGTGATACAGTGGCCTGATGGTGGTGACGGAATAGAGGAGGAGGAGGAGGTTGGAGGGTTGGAACGGGCTTTGAAGGCTGTGATTGAGAATCGGGCTTTTGTTGGCCCTAATATGGGCCGGGTGATGTTGGGCCAGAAACGGGCTCGGGATAGCTATGGTTCGTCTAGTACTAGTAGTGAAATTGACTGCGCCTTCTTGAATTCTTGCTGA 789 0.5665 MLPFRRFYGFESWLDHESGHVQSSLIKAVELNGGRSKGERKSTEACKSHREAERRRRQRINAHLSTLRSLLPNAAKSDKASLLAEVVQHVKRLRKEADDVACRRHDGDSSSSCSGEPGSVLSAEDADTWPFPGESDEATLSYCDGEPKRVKATLCCEDRPGLNQDLTQAIRSVRAKVVRAEMMTVGGRTKSVVVIQWPDGGDGIEEEEEVGGLERALKAVIENRAFVGPNMGRVMLGQKRARDSYGSSSTSSEIDCAFLNSC. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01784 262 MobiDBLite consensus disorder prediction 32 55 - -
Seca7g01784 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 93 IPR011598 GO:0046983
Seca7g01784 262 Gene3D - 147 225 - -
Seca7g01784 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 100 IPR036638 GO:0046983
Seca7g01784 262 SUPERFAMILY ACT-like 150 220 IPR045865 -
Seca7g01784 262 Pfam Helix-loop-helix DNA-binding domain 46 93 IPR011598 GO:0046983
Seca7g01784 262 MobiDBLite consensus disorder prediction 99 122 - -
Seca7g01784 262 PANTHER TRANSCRIPTION FACTOR BHLH30 35 243 IPR045847 GO:0003700|GO:0006355
Seca7g01784 262 MobiDBLite consensus disorder prediction 33 55 - -
Seca7g01784 262 Gene3D - 38 102 IPR036638 GO:0046983
Seca7g01784 262 SMART finulus 50 99 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01784 Seca-Chr7 35939208 35940887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01784 41 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 39.024 3.14e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Seca7g01784 HLH 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01784 - - gmx:100816394 342.043