Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01777 ATGCAGAACGCAACGAGAGCTGAAGCAGAACGATTTCTGGGGATCTCGGAGAAGCTGTTGCAGAACCGCGATCTGATGGGTTCAAGGGAATTCGCGATCCTTGCTCAAGAAACTGAGCCCCTTCTAGAAGGTTCCGACCAGATCCTCGCCATCGTCGACGTCCTCCTCGCCTCCGAGAAGCGCGTGAACAACCACCCTGACTGGTACGCCATTCTCCAAATCGATCGCCGTTCCGACGACCTCGACCTCATCAAACGGCAGTACCGCCGTCTCGCCCTCCTCCTCCACCCTGACAAGTCTCGCTTTCACTTCGCCGACCACGCTTTCAAGCTCGTCGCCGATGCTTGGGCCATCCTCTCCGACCCAATCAAAAAATCTCATTACGACAAAGACCTCTCTTTCTTTTCCCGTGTCGATTTATCCGTCCCTGGTTGGGTCCAGCAGGATAAGTTACCCGTTCGCAGGACTGGGCCCGGGCCTGGGCCTGGACCCAGCCCAAGCTCTCGCAACAACAACCAGGGTTATGATAATCGTGGCAGCGCGTCTGCTGCAAGGGACGAGATTGCTGCAGATGAGAACTCGCGACGGAGGAATTCGACTTTCTGGACGGCGTGTCCGTACTGTTACCGTATGTACGAGTACCCTAGGGTTTACGAGGGTTGCTGCTTGAGATGCCAGAATTGCGAGAGATCCTTCCATGGCGTTGCGGTTCAGTCTATGCCGCCGCTGGTGCCAGGGCAGGATGCTTATTATTGTTGCTGGGGTTTCTTTCCGATGGGATTCGTCATCGGAAACAATAGTTCGCCGGAGAAAGAGGCTGCTCCGGAAGCTCCGGAAGCTCCGGCGGCTCCGGCGCAGCCATCGCCACAGCCACAGCCACAGCCACAGCCTGCTTCTTCGCTTCCGAATTGGATGCCAGCGCCGGCGGTGAACGGCGGAAATAATGCAACGCCGGCTCCGGCGTCAACGCCGGGGAGAGTGACTAGGTCAACTGCAGCTGCGGGTGTTCCGAATGGGGTTGCTTCGGGTTCGGGATCTGGTCAGAAGAAGCGAGGGAGGCCGCGAAAGTTTCCTCTGTCCTAA 1083 0.5753 MQNATRAEAERFLGISEKLLQNRDLMGSREFAILAQETEPLLEGSDQILAIVDVLLASEKRVNNHPDWYAILQIDRRSDDLDLIKRQYRRLALLLHPDKSRFHFADHAFKLVADAWAILSDPIKKSHYDKDLSFFSRVDLSVPGWVQQDKLPVRRTGPGPGPGPSPSSRNNNQGYDNRGSASAARDEIAADENSRRRNSTFWTACPYCYRMYEYPRVYEGCCLRCQNCERSFHGVAVQSMPPLVPGQDAYYCCWGFFPMGFVIGNNSSPEKEAAPEAPEAPAAPAQPSPQPQPQPQPASSLPNWMPAPAVNGGNNATPAPASTPGRVTRSTAAAGVPNGVASGSGSGQKKRGRPRKFPLS. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01777 360 PRINTS DnaJ domain signature 69 87 IPR001623 -
Seca7g01777 360 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca7g01777 360 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca7g01777 360 Gene3D DnaJ domain 55 139 IPR036869 -
Seca7g01777 360 MobiDBLite consensus disorder prediction 268 360 - -
Seca7g01777 360 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Seca7g01777 360 Pfam DnaJ domain 67 129 IPR001623 -
Seca7g01777 360 MobiDBLite consensus disorder prediction 315 345 - -
Seca7g01777 360 MobiDBLite consensus disorder prediction 150 192 - -
Seca7g01777 360 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 306 - -
Seca7g01777 360 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Seca7g01777 360 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Seca7g01777 360 CDD DnaJ 67 121 IPR001623 -
Seca7g01777 360 SMART dnaj_3 66 124 IPR001623 -
Seca7g01777 360 MobiDBLite consensus disorder prediction 280 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01777 Seca-Chr7 35734209 35735291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01777 2 359 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.699 5.12e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01777 - - gmx:100816918 508.449