Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01774 ATGAAGGGCATAATTACAAGGTATAAACAGCACTCTCAAAGCATCAACGAATTGGACAGACCTCTAGAACTGCAGCTAGAGAATAATAACAAGATAGCTGAGTTGCATAAGGAAGTTGCTGATAAAACCCAACAACTAAGGAGGATAAAAGGTGAGGATTTTCAAGGGCTAAACTTAGATGATTTGCAGCAACCGGAGAAAACACTTGAAACGGGACTCAAGCGCGTGATTGAGATCAAGGAAAAGAGGATTATGGATGAGATTGTTGCACTTAAGAAGGGAAACACGTTAGAAGAGGAGAACAACCATTTGAAGCAAAAGATGGCTGCTATGGTGTGTAAGGGAAGAAGTCCTTTCCTGGTGGACTCAGATATTACCATGCAGGAAGTTGTCTCATCAGATTCTATGAATAACATCTGCAGTTGCAACAGTGGCCCTTCTCTTGAGGATGATTCCTCTGACACATCTCTCAAGTTAGGGGTTGCCCTTCCCTAA 495 0.4222 MKGIITRYKQHSQSINELDRPLELQLENNNKIAELHKEVADKTQQLRRIKGEDFQGLNLDDLQQPEKTLETGLKRVIEIKEKRIMDEIVALKKGNTLEEENNHLKQKMAAMVCKGRSPFLVDSDITMQEVVSSDSMNNICSCNSGPSLEDDSSDTSLKLGVALP. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01774 164 ProSiteProfiles K-box domain profile. 25 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca7g01774 164 Coils Coil 32 52 - -
Seca7g01774 164 Pfam K-box region 28 108 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01774 Seca-Chr7 35660487 35664569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01774 1 161 MADS-box Gene Family AT4G24540 44.242 1.65e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01774 - - rcu:8268411 180.259