Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01756 ATGAGCGAAGAAGAGAAGAAGATGTGTCTTCTTACCGCAACGAACACAGATTTCAATGCAGGTTTTCTTCTTGATCCTGCAAAATGTGCTGCGCTGAATTTGCAAGACAAACAAAGACTAGTCCATGAGATTGCTCAGTCAAAAGATGCCCCAAATATGCTTCATTCATTTACTCGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACTAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAAATCCAATTCAGATGTCAACCAAAATACTTGTGCCCATTCTCCTGCCAAAAGTTGCATTGGATCTAAAAGGAAAAAAGGACCTCCATCTCTGGATTTACATTATGCTCCTCTAGAGAACAGTAAAGAGGAAACGGTAAAAATCTTGGTCTGTCAGAATGTTGCATGCAGAGCTACATTGAATCCTGAAGATTCTTTCTGCAAAAGATGTTCATGTTGTATATGTCATTGCTATGATGATAACAAGGATCCAAGTTTGTGGTTGACCTGCAGTTCTGATCATACCAATGAGGAGTCATGTGGAATGTCGTGCCATTTGCAATGTGCTTTGAGTAATCAAGTATCTGGCATTTTGAAGGGCCGTGGTGGTATAACCTTGGATGGAAGCTTCTATTGTGTTTCATGTGGAAAAATTAATGAACTAATGAGGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAGTGGATATACTCTCTTTACGAATATCCTTGGCCCACAGAATTCTTGTGGGAACAGAAGTCTACAAGGAAGTGCAGAAGATTGTTGAAACTGCTCTCAAGTTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCTCGGATGACACGTGGAATTGTGAGCAGGCTCTCAAGTGGTGCTGAGGTTCAGAAGTTGTGCAATACTGCAGTTGAATGTTTTGATTCAAAGTTTTCTGACCTCTTCTATAATTGTGCAGAAAAGAAAGATGCACCAACATGCTCTATACGTTTTGAAGAGTGTCTTCCTACCTCAGTTATCATCGTGCTAGAATACAATGATAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGTACCGAATGTCAACAATGGACTACCCAGAACAACCCGCCTTCATTGTTTTGAGGCCTGAGAAAAAATTCAAGTTAGAAAACCTCCATCCTTCAACTGAATACTTTTGCAAGGCTTCTCTATTCAGCAGCACAGGGATTTTGGGAGCAGCTGAAGCTAAATGGGTGACACCTTGTGAACCCATAAGTTCTCCTCCAAAAATAATTAGACATGGTGGGAATCATTCAAGAGGTACAGTCATGGACATAAGTGCTCAAGACCAAATTAAGATAACTGCTGAAAATCATCAAGTAGAATCTGCCAACTCTGACATAAAGTTATCACCTGGAGACCATCCTGCAAAAAACATGTTTTTGAACAACAGGGGCAGGTTTGAAGAGTTTCTCACAAAGCCTCCATCAGTTGAACCTTTTTCATATAAAAATTTTGCAGCAGTTTCACCATCCACACCTTCTAAATCCAGTGAAATGAGGCAAATTGATGGTTTGAGTTCTAGAAAGCGCTTGAAGGAAAATGATTATGAGTATTCTGTTAGGGTAGTCAAATGGTTAGAGAATCAAGGGCACATAGAAGAAATCTTCAGAGTGAAATTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCACTGATTGATGACCCAGCAAGCTTAGCGGATCAGCTCATACACACTTTCACAGACGAAATATATTGCGAGCAGAAATCTTAG 1869 0.4018 MSEEEKKMCLLTATNTDFNAGFLLDPAKCAALNLQDKQRLVHEIAQSKDAPNMLHSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKSNSDVNQNTCAHSPAKSCIGSKRKKGPPSLDLHYAPLENSKEETVKILVCQNVACRATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCSSDHTNEESCGMSCHLQCALSNQVSGILKGRGGITLDGSFYCVSCGKINELMRTWRKQLLVAKEARRVDILSLRISLAHRILVGTEVYKEVQKIVETALKLLENEVGPLDHVYARMTRGIVSRLSSGAEVQKLCNTAVECFDSKFSDLFYNCAEKKDAPTCSIRFEECLPTSVIIVLEYNDKLLKNFLGCRLWYRMSTMDYPEQPAFIVLRPEKKFKLENLHPSTEYFCKASLFSSTGILGAAEAKWVTPCEPISSPPKIIRHGGNHSRGTVMDISAQDQIKITAENHQVESANSDIKLSPGDHPAKNMFLNNRGRFEEFLTKPPSVEPFSYKNFAAVSPSTPSKSSEMRQIDGLSSRKRLKENDYEYSVRVVKWLENQGHIEEIFRVKFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFTDEIYCEQKS. 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01756 622 PANTHER VIN3-LIKE PROTEIN 2-RELATED 22 464 IPR044514 GO:0010048|GO:0040029
Seca7g01756 622 Pfam PHD - plant homeodomain finger protein 145 264 IPR032881 -
Seca7g01756 622 CDD PHD_VIN3_plant 165 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01756 Seca-Chr7 35144933 35150231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01756 545 622 PHD Gene Family AT5G57380 41.026 1.28e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01756 - - gmx:100785502 1000.35