Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01753 ATGAGAATGAGGATAGCTATGGGAATAGCCTACTATTTGGAGCATTTGCATCAGCTGACACCACCCATTGCCCACAAAAACCTGCAATCATCCACTATATACCTGACTGAAGATTATGCTGCTAAATTATCTGACCTTAGTTTCTGGAGTGACATAGATGCTACAAAGAAGGATTCTGAAGCCTCACAGACATTAGAAACAACTACAACATATATAAAGGGCAATGTATACAGCTTTGGGGTAATATTGTTTGAATTGATGACAGGGAGAATTCCCTATGCAATGGACAATGGCTTTCTTGCAGATTGGGCAGCAGAATATTTAAGGGGACAACCCTTGAGAGACTTGGTGGATGCAAGCTTGTGA 366 0.4098 MRMRIAMGIAYYLEHLHQLTPPIAHKNLQSSTIYLTEDYAAKLSDLSFWSDIDATKKDSEASQTLETTTTYIKGNVYSFGVILFELMTGRIPYAMDNGFLADWAAEYLRGQPLRDLVDASL. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01753 121 PANTHER PROTEIN MALE DISCOVERER 2 1 121 - -
Seca7g01753 121 SUPERFAMILY Protein kinase-like (PK-like) 2 107 IPR011009 -
Seca7g01753 121 Pfam Protein tyrosine and serine/threonine kinase 3 94 IPR001245 GO:0004672|GO:0006468
Seca7g01753 121 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Seca7g01753 121 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01753 Seca-Chr7 35066598 35066963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01753 2 121 Receptor kinase-like Gene Family AT3G58690 34.783 7.08e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Seca7g01753 PK_Tyr_Ser-Thr 1.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01753 - - lja:Lj0g3v0089589.1 202.986