Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01708 ATGGTGTTGAGGAAAGTAGGCAAGTATGAGATTGGGAGAACCATTGGAGAGGGAACCTTCGCGAAGGTCAAATTCGCTCAGAACACAGAAACTGGCGAGAGCGTCGCCATGAAGGTGCTCGATCGCAGCACCATTATCAAGCACAAAATGATCGACCAGGTTCTAGCAAGCCGTACTAAGATTTATATCATACTGGAGTACATTACAGGCGGTGAATTGTTTGATAAAATTGTACACCACGGGCGTCTCAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGAGTTTATCACAGAGATTTAAAGCCTGAAAACCTTTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTGCCAGAACAGGGGGTTAGTATGCTTCGGACAACTTGTGGGACTCCTAATTATGTAGCCCCTGAGGTACTCAGTCACAAGGGTTATAATGGTGCTCTGGCAGATGTTTGGTCCTGTGGGGTTATCCTCTATGTACTAATGGCTGGATATCTCCCCTTTGATGAGCTTGATCTAACTACGTTATACAGAAATACTGCTTTATTTTTATCTAAGAGTTTCTTTCTTTCAAGATGTTATGTTCAATTGAAAATTCACATTATTATTGATATTGTTAATTTTTTTATTACTCCTTTCCAGATTGAGAAAGCAGAGTTTTCATGCCCTCCTTGGTTTCCTGTGGGAGCAAAATCTTTGATACACAGAATTTTGGACCCAAATCCTGAACGTCGTATAACCATTCAGCAGATTAGAAATGATGAGTGGTTTCAAAAAGACTATGTTCCTGTCCATCTCCTCGAGTATGAAGATGTAAATCTGGATGATGTAAATGCTGCATTTGACAATGCTGAGGATCAGAGGTCTAATCAGCAATGTGAGAATGAGGACATGGGTCCTCTAATTCTTAATGCATTCGACATGATAATTTTATCCCAAGGCTTAAACCTTTCAACACTCTTTGAACGTGGACAGGACTCTATGAAGTACCAAACACGCTTCCTCACTCAAAAGCCAGCAAAGATGGTTTTATCAAGTATGGAAGTTGTGGCACAATCAATGGGATTTAAGACACATATTCGCAACTATAAGATGAGAATAGAGGGTATTTCAGCAAATAAGACTTCTTATTTCTCCGTTATACTGGAAGTTTTTGAAGTTGCTCCTACATTTTTCATGGTGGACATTCAGAAAGCAGCTGGAGATGGAGGTGAATATCTCAAGTTTTACAATAATTTTTCTAGCAATCTTGAAGATATCATCTGGAAACCGCCTGATGAAACAAGCAAATTAAGGATCTCCATGATTAAAAGCAAAAGGCAGTAG 1383 0.3926 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMIDQVLASRTKIYIILEYITGGELFDKIVHHGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPEQGVSMLRTTCGTPNYVAPEVLSHKGYNGALADVWSCGVILYVLMAGYLPFDELDLTTLYRNTALFLSKSFFLSRCYVQLKIHIIIDIVNFFITPFQIEKAEFSCPPWFPVGAKSLIHRILDPNPERRITIQQIRNDEWFQKDYVPVHLLEYEDVNLDDVNAAFDNAEDQRSNQQCENEDMGPLILNAFDMIILSQGLNLSTLFERGQDSMKYQTRFLTQKPAKMVLSSMEVVAQSMGFKTHIRNYKMRIEGISANKTSYFSVILEVFEVAPTFFMVDIQKAAGDGGEYLKFYNNFSSNLEDIIWKPPDETSKLRISMIKSKRQ. 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01708 460 Gene3D Transferase(Phosphotransferase) domain 1 68 284 - -
Seca7g01708 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Seca7g01708 460 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Seca7g01708 460 Gene3D Phosphorylase Kinase; domain 1 2 56 - -
Seca7g01708 460 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Seca7g01708 460 CDD CIPK_C 323 438 - -
Seca7g01708 460 Pfam Protein kinase domain 54 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01708 460 SMART serkin_6 9 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01708 460 Gene3D Kinase associated domain 1, KA1 316 442 - -
Seca7g01708 460 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Seca7g01708 460 Coils Coil 293 313 - -
Seca7g01708 460 Pfam NAF domain 319 377 IPR004041 GO:0007165
Seca7g01708 460 ProSiteProfiles Protein kinase domain profile. 9 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01708 460 FunFam Maternal embryonic leucine zipper kinase 4 205 - -
Seca7g01708 460 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 423 - -
Seca7g01708 460 FunFam Non-specific serine/threonine protein kinase 316 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01708 Seca-Chr7 33404962 33410935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01708 1 402 CBL-interacting serine-threonine protein kinases AT4G24400 71.158 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca7g01708 Pkinase 7.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01708 - - gmx:100785444 744.577