Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01705 ATGGCCATGGACAACTACTCCTACCCTAATTCCCGCGATTCCTCGCCTCGTTCTCGCGATGTAGTGGACAACGACAACCCCTCCACCTTCGAAGAACCCCCTCCTTCCTACAAAGTCAAGCTAATGTGCAGCTACGGCGGCAAAATCCAACCCAGGCCTCACGACAACAACCTCTCATACATCGGCGGCGACACCAAGATCCTCGCCGTCGATCGAAACATCAAATTCTCTGCCGTCATGGCCAAGCTCTCTTCTCTCACCAACTCCATCGATTTCTGCTTCAAGTACCAACTCCCCGGCGAAGACCTCGATTCCTTGATCTCCGTCACCAACGAGGAAGATCTCGACCACATGATGGTCGAGTATGATCGCCTGTGTCGCACCTCACCTAGACCTGCAAGGTTGAGGCTCTTTCTCTTTCCACTCAACAACGCTCCCAGCATCAATCTCGTTCCCACTGAGTCGAAGCCGGAGAAGCAGTGGTTCGTGGACGCTCTCAATTCCGTTCAGGTTCCGTCTCTAGAAGCTCCTTCTCCGTCGCCTCTGCCGGCGGTGAATCCGGATTTTCTGTTTGGATTGGATAATGCATATCCCGCGGTTCCGGCGGTTAAACAGTCGGACTTCCCGGAAATTCCGGCGAAAGATGCGGTGGCGGGATCGGAGTGCGGGTCCGAAGATCGGCAAACGGTTAGAGAATCCGAAATTCAGGAGATACAGTTACAGAGATTGCAGCTTGTGAACAATGAGCAACGAAAAAACGAAGAAGAGAATGGTAGGGTTTACGGTGTGGACTATTACCATCAGAAAAACTCGGAGAAAGTGGCGCCGTTTATAACACATGCACCTGCTTCGCAAGCGGTTCCGGTTCATGCTCCTGGACCGGTTTCGGTTCAAGCTTCATTTTTGCCAGAAAGGCATATCCCTGGCGGTGGTTATCCGTTAACGGTTTCTGCAAATGGAACCGAACCGGGTCCGGTTTATCTCATTCAAACACCTTCTGGAATGTACCAAGCCGTCCGGCCTGTAACCGGACCGACGGGTCAACCGGTTTACTTCCTTCAACCACCGAGTTCGGTTTCGCTTTCGCATTCACAAGCAACGCACAAGGTTGCTTACAATGGTTCAGAGGCTGGTGTGGTTTCCGAGCGTGGCTATTCGCAGGTTGCGTATTTGCCTGACAGGTCAGGTTTGCGGCGACAGGCCGCGGCGGCGCCCGGCGGTGACGGGTGGCAAGGGTGTTGA 1242 0.5354 MAMDNYSYPNSRDSSPRSRDVVDNDNPSTFEEPPPSYKVKLMCSYGGKIQPRPHDNNLSYIGGDTKILAVDRNIKFSAVMAKLSSLTNSIDFCFKYQLPGEDLDSLISVTNEEDLDHMMVEYDRLCRTSPRPARLRLFLFPLNNAPSINLVPTESKPEKQWFVDALNSVQVPSLEAPSPSPLPAVNPDFLFGLDNAYPAVPAVKQSDFPEIPAKDAVAGSECGSEDRQTVRESEIQEIQLQRLQLVNNEQRKNEEENGRVYGVDYYHQKNSEKVAPFITHAPASQAVPVHAPGPVSVQASFLPERHIPGGGYPLTVSANGTEPGPVYLIQTPSGMYQAVRPVTGPTGQPVYFLQPPSSVSLSHSQATHKVAYNGSEAGVVSERGYSQVAYLPDRSGLRRQAAAAPGGDGWQGC. 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01705 413 CDD PB1_UP2 42 140 - -
Seca7g01705 413 SMART PB1_new 53 142 IPR000270 GO:0005515
Seca7g01705 413 SUPERFAMILY CAD & PB1 domains 54 147 - -
Seca7g01705 413 Gene3D - 59 141 - -
Seca7g01705 413 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Seca7g01705 413 MobiDBLite consensus disorder prediction 1 35 - -
Seca7g01705 413 PANTHER OS05G0427100 PROTEIN-RELATED 8 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01705 Seca-Chr7 33376533 33377774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01705 37 169 MAP Kinase Kinase Kinase AT5G57610 40.741 3.62e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01705 - - pcin:129294124 384.415