Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01675 ATGGCAAACCAGACAAAACAGAATTTCCCACCAGAAACCATGGAAGAGATCTTGAATTCAATGAAGCAGAGTTTTGAATTAGCAAGAAACTTTGAAAAAGAACTACCCAACATGGCTAACCAACCTGATATGCTACTCTTGTCCATTGATGAGGTAGTGAAAGCATTTGGTGGTGCCAAAGAAAGGCTAGTGATGATGATGTTATCACAACAACAACAGGACATGACAATAACACCTTCTTCATTTGCTTCAATGCTGCCTCATGATCATGCTTTCAAGCAGGAAGCACAAACATTGGATCAGCAATTGGTTCTAATGCAGCAGCAATTTGATGTGAGGACCTTGTTTGGAAACAAGATGATGAGTACTGGTGGGGATGTTCATCTGCAGTTAAAGAATAGGGGTGCCCTGATGAGGATTGGTGAAATGGGTGGAAGAGATGTTGAAGGTTCATCAAAAGGGTCTGAAGGAGAAATTCAAGGAATAGAAGCATCACCCTCAAGACCCAAAAAAAGTAGCAGCAGGAAGAATAATCTGGAGAAGAAGATAATGATATGTCCAGCACCACAAGTTGGAAACACAGAGATCCCACCGGAGGATGGTTTCACTTGGAGAAAATATGGCCAGAAAGAGATACTTGGTTCCAAATACCCAAGGAGTTACTATAGGTGTACCCACCAGAAATTATATGCTTGTCCAGCAAAGAAGCAAGTACAACGACTTGATGAAAATCCTAACATGTTTGAAGTAACATATAGAGGTGAACATACATGTCACAAGTCTTCAACAGCACCATCATCATATCCACTACCACCACCATCACAACCACTAGTAATGGACATGAATCATATGATCTCAACAGACATAACTCAAACCATTTCACCCCAGTTGTCTCCATCATCAACTTCAGTCACCGCGTGGCTGTCGTCCACCGTGAATCTCAGCCTCCATGGTGGTGGTGGCCGCGGCGGCGGTCGTGGACCCTCTACTTCAAAATATGGTAGCACTGATTATCCTGTGGCTGATATGGCTGATGCTATGTTTAATTCTGGTAGTAGCAGTGGCAATAGTATGGAATGTCTTTTTCCTCTTGCTGAAGAAAATTGGGAACAAGGTGAGAAGAAAAATTGA 1131 0.4244 MANQTKQNFPPETMEEILNSMKQSFELARNFEKELPNMANQPDMLLLSIDEVVKAFGGAKERLVMMMLSQQQQDMTITPSSFASMLPHDHAFKQEAQTLDQQLVLMQQQFDVRTLFGNKMMSTGGDVHLQLKNRGALMRIGEMGGRDVEGSSKGSEGEIQGIEASPSRPKKSSSRKNNLEKKIMICPAPQVGNTEIPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYACPAKKQVQRLDENPNMFEVTYRGEHTCHKSSTAPSSYPLPPPSQPLVMDMNHMISTDITQTISPQLSPSSTSVTAWLSSTVNLSLHGGGGRGGGRGPSTSKYGSTDYPVADMADAMFNSGSSSGNSMECLFPLAEENWEQGEKKN. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01675 376 Gene3D WRKY domain 188 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g01675 376 SMART WRKY_cls 198 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01675 376 SUPERFAMILY WRKY DNA-binding domain 196 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g01675 376 MobiDBLite consensus disorder prediction 144 181 - -
Seca7g01675 376 Pfam WRKY DNA -binding domain 199 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01675 376 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 90 266 IPR044810 GO:0003700
Seca7g01675 376 ProSiteProfiles WRKY domain profile. 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01675 Seca-Chr7 32411732 32415359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01675 14 363 WRKY Transcription Factor Family AT2G40740 33.903 4.14e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g01675 WRKY 8.3e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01675 - - mtr:11424132 348.591