Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01674 ATGGATATCCTCTGCCCTGAAAGTTTGAGCAAGAGAATAGTTGTGGCCAAGAAGCTAGCTCAGGGTCAAGAAGCTGCTACCCAGCTCAAGTTTCTGCTTCAGAATCCCTTTGAAGCTGATGGGTCTCTCTCATCAGAGGAACTTGTGACCAATGTGCTGAGATCTTTCACAGAGGCTCTTTCTATTGTAACCTCTTCCTCCTCTCAACCCTCTGCTGATGGCGCAGATGCAGATCAGAATAATCTGCTTAATTCCGGCGAAAATGGGTCGCCGGTGGTGGCCGGAGATTCCAATGAGAGTGGGAAGAAATATTCCTCTCTGGCCAAAAAGGGTAGGAGAGGTTGCTACAAAAGAAGGAGAAGTTCACAGACAAAGACCATAGTTTCCCACACTCACAGTGATAGTCATGCATGGAGGAAGTATGGACAGAAGGAAATCCTGAATTCTGAATTCCCTAGGAGTTACTTCAGGTGCACTCACAAGTATGATCAAGGTTGCTCAGCAACAAAACAGGTGCAAAGGACACAAGAGAATCCAGATATGTACCAAACTACATACATTGGCATTCACACATGCAAACCCACCCCAAAGCCTACACAATTGATCAAAGATTATAATTCTACTACTTGGGATTCATTTCTGCTAAATTCTGATCCTGATTCTAGTAGTGTTCCAAATGAACAGGATCATCATCATCATCACCATTTTATTAGCTCACCAAGCCTAACAATAAAACAAGAATATCCCAAAGAGGACACTTTTGCAGCAACTATGCCTTTAAACATGGAATCTGATAATGCAGATACTGTGTATTTTGGGATGGAGTCTGTTCATTTTGGCAGTGACTTCCACTTTGATGAAAGTCAGTTGCTTCAATGCTTTGATAAGTGTCCTATGCTTAATTAA 906 0.4249 MDILCPESLSKRIVVAKKLAQGQEAATQLKFLLQNPFEADGSLSSEELVTNVLRSFTEALSIVTSSSSQPSADGADADQNNLLNSGENGSPVVAGDSNESGKKYSSLAKKGRRGCYKRRRSSQTKTIVSHTHSDSHAWRKYGQKEILNSEFPRSYFRCTHKYDQGCSATKQVQRTQENPDMYQTTYIGIHTCKPTPKPTQLIKDYNSTTWDSFLLNSDPDSSSVPNEQDHHHHHHFISSPSLTIKQEYPKEDTFAATMPLNMESDNADTVYFGMESVHFGSDFHFDESQLLQCFDKCPMLN. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01674 301 Gene3D WRKY domain 115 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g01674 301 MobiDBLite consensus disorder prediction 66 104 - -
Seca7g01674 301 SUPERFAMILY WRKY DNA-binding domain 129 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g01674 301 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01674 301 MobiDBLite consensus disorder prediction 107 125 - -
Seca7g01674 301 ProSiteProfiles WRKY domain profile. 133 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01674 301 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g01674 301 MobiDBLite consensus disorder prediction 66 134 - -
Seca7g01674 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 219 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01674 Seca-Chr7 32405284 32407810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01674 10 300 WRKY Transcription Factor Family AT3G56400 34.824 3.14e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g01674 WRKY 9.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01674 - - gmx:100796071 290.426