Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01648 ATGGTTTCCTCTCAGTTCTCTGCCTTAAATAGAAATTGTTCACAGAAGCCTTTTCTGAACCCCTTGCTTCTTCCAAGTGGACCTCCTGATTTTGTGGATTCTGAATTTTCTGATGTATTTGGTCCATCTCCTGTTGAAGCCTCAATAGCAGTGAGCACTGGGAAACCTGGAAATTTGGTCCATCAAACTTTCCTGGCTCCCACAACCTTTGTTAGTCAGTCATTGGAGCTTAACAGGCTCACTTTACATGAGACAGGTGATGCATTGGATCTTGTGGAGGAGGTCTTTAGAGAAACACAGAAAGAGCTTAAGGAAGATGCTGTTAACATTAACAATGCTGCTGTAGAGGAAAATAATTTACAATTCAATAATTACTGTCTGAATCTGAATCATCAGACTGTTGGAGTTGATGATTTTGAAGTTTTGAAGGTTGTTGGGCAAGGTGCTTTTGGTAAGGTGTACCAGGTGAGGAGGACAGGTACTTCAGAAATATATGCTATGAAGGTCATGCGCAAGGATAAGATTATGCAGAGAAATCATGTTGAATATGTAAAATCTGAAAGGGATATATTGACAAAGGTGGACCATCCATTTATTGTGAGGCTCAGATACTCATTCCAAACCAAATATAGGTTGTACCTTGTGCTTGATTTTGTCAATGGTGGTCACCTCTTCTTTCAACTTTATCACCAAGGCCTATTCAGGGAAGATTTGGCACGCTTCTATGCTGCAGAGATTATTTGTGCTGTTTCTCATCTTCATGCAAATAATATAATGCACAGGGATCTTAAACCTGAAAATATTCTTCTCGATGCAGATGGTCATGTAGTGTTAACAGATTTTGGACTGGCAAAGGAATGCAATGAGGCTGAAAGGTCAAATTCTATGTGTGGAACTTTGGAGTACATGTCCCCTGAAATTGTTATAGGGAAAGGTCATGATAAGACAGCCGATTGGTGGAGTGTGGGAATTTTACTATATGAAATGCTTACAGGGAAGGTCAGGACTTTGGACTTTGGTGTTTTTTTTTTCATCTTCTTTTAG 1044 0.3966 MVSSQFSALNRNCSQKPFLNPLLLPSGPPDFVDSEFSDVFGPSPVEASIAVSTGKPGNLVHQTFLAPTTFVSQSLELNRLTLHETGDALDLVEEVFRETQKELKEDAVNINNAAVEENNLQFNNYCLNLNHQTVGVDDFEVLKVVGQGAFGKVYQVRRTGTSEIYAMKVMRKDKIMQRNHVEYVKSERDILTKVDHPFIVRLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSHLHANNIMHRDLKPENILLDADGHVVLTDFGLAKECNEAERSNSMCGTLEYMSPEIVIGKGHDKTADWWSVGILLYEMLTGKVRTLDFGVFFFIFF. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01648 347 ProSiteProfiles Protein kinase domain profile. 139 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01648 347 CDD STKc_AGC 145 333 IPR045270 GO:0004674|GO:0005524
Seca7g01648 347 Gene3D Transferase(Phosphotransferase) domain 1 219 334 - -
Seca7g01648 347 FunFam Non-specific serine/threonine protein kinase 136 241 - -
Seca7g01648 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Seca7g01648 347 Gene3D Phosphorylase Kinase; domain 1 137 218 - -
Seca7g01648 347 SUPERFAMILY Protein kinase-like (PK-like) 120 335 IPR011009 -
Seca7g01648 347 PANTHER RIBOSOMAL PROTEIN S6 KINASE 112 333 - -
Seca7g01648 347 SMART serkin_6 139 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01648 347 Pfam Protein kinase domain 139 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01648 347 ProSitePatterns Protein kinases ATP-binding region signature. 145 168 IPR017441 GO:0005524
Seca7g01648 347 FunFam Non-specific serine/threonine protein kinase 220 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01648 Seca-Chr7 31709865 31713276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01648 1 333 AGC Kinase Gene Family AT3G08720 63.265 3.91e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Seca7g01648 Pkinase 7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01648 K04688 - gmx:100803509 504.982