Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01645 ATGGCAGGCAACCATTATCGCTTGTTTTCTTTTTATTGTTTTGTCCTTCTTCTCATAACGGTATCTCAGGCCCAGCCAAATTTCTCTCCCTTTTGTTTCAACGATAAAGGAAACTACACAGTCAATAGCACCTATCATAACAACCTCAACACGCTTTTGTCCAGTCTCTCTTCCAACACAGAAATCGATTACGGTTTCTACAATTTCTCTTATGGCGAAGACACTGACAAAGTATACGCAATTGGACTGTGCAGAGGAGATGTTAAACCTGACGATTGCCGTAACTGCCTCAACAATTCAAGAGTCCTTCTCACACAGAATTGTCCAAATCAGAAAGAAGCTATTGGTTGGATTGATAACTGCATGTTGCGTTACTCAAACCGGTCAATATTTGGCATCATGGAAACTTCACCATGGATTCGTATGTGGAACCCAAACAACGCAACACAGGTGGATGAGTACAATCAAGTTCTCGGGAACTTGTTGCGTAGCATAAGAGACAAAGCTACATCAGGGGACTCAAGGCTCAAGTATGCTACAGGAAACGTTACTGGTCCGAATTTTCAAGAGATATATGGGCTTATGCAGTGCACACCTGATCTATCTGACTTAAAATGCGATGAATGTTTGGGTGGGGCTATCTCAGATCTCCCAGTATGTTGTAATAATAAGGTAGGAGGTAGAGTTATTAGACCCAGTTGTAATATTAGATATGAAACATACCGCTTCTATCAAGCTACTGCAGAAGCACCATCACCGTCATCGCCGTCAACACCGCCACCACCACCATCCACCAATAACACTTCCTCGGGAGGAGGAAAAAGCAACACATCACTAATTGCCATTGCCATAGCAGTCCCAGTTGCAGTTGTTGTTTTGGTGCTCAGTATTATCTGCATCTATTTGCGAATGAAGAAGCCAAGGGAAATTTCAAAAATTCCTTCAGAAGATGATGATGAAGAAATTAAAACCAATGAGTCATTGCAATTTAACTTTGACACCATACGACTTGCTACAAATGACTTTTCTGATTCTAATAAACTTGGAGAAGGTGGATTCGGAGCTGTTTACCGGGGTAGGCTCTCTAATGGACAAATGATTGCTGTCAAAAGGTTGTCAATGAATTCCAACCAAGGAGATGTGGAATTTAAGAATGAAGTGCTTTTAGTGGCTAAGCTTCAACACCGGAATTTAGTTAGGCTACTTGGTTTCAGTCTAGAAGGGAGAGAAAGACTATTAGTCTATGAATTTGTTCCTAATAAAAGTCTTGACTACTTCATATTTGATCCAATAAAGAAAGCACAATTGGATTGGGAAAAGCGCTACAAAATCATTGGAGGTATTGCTCGAGGCCTTCTTTACCTTCACGAGGATTCACAACTACGTATTATACACCGAGATCTCAAAGCAAGCAATATCCTCTTAGATGAAGTGATGAATCCAAAGATATCAGATTTTGGCATGGCAAGACTGATTGTTGTGGATCAGACACAAGTAAATACAAGTAGAATTGTTGGAACCTATGGGTACATGGCACCAGAGTATGCAATGCATGGACAATTTTCAGTGAAATCAGATGTCTTCAGTTTTGGTGTACTAGTTCTTGAGATAGTAAGTGGCCAAAAAAATAGTGGCATTCGTCATGGGGAGAGCGTGGAGGATCTATTGAGCTTTGCATGGAGAAATTGGAGGGAGGGGACAGCTACAAATATTATAGATCCATCATTAAACAACTGTCCACGAAATGAAATGATCAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGCCAACAGACCAACTATGGCTACCATTGCACTCATGCTTAACAGTTATTCTCTCACTCTCCCTGTACCATCAGACCCTGCATTTTTTGTGGACAGCAGAACTAGAAGCCTTCCAGACATGCCGTTGTGGGAAGATAATTCAGGGGCAACAAGATCAAGTGAATCCACAACTAAATCAATTCGAGAATCGGTAAATGAGGCTTCAATTACCGAGCTATATCCTCGTTAG 2025 0.4089 MAGNHYRLFSFYCFVLLLITVSQAQPNFSPFCFNDKGNYTVNSTYHNNLNTLLSSLSSNTEIDYGFYNFSYGEDTDKVYAIGLCRGDVKPDDCRNCLNNSRVLLTQNCPNQKEAIGWIDNCMLRYSNRSIFGIMETSPWIRMWNPNNATQVDEYNQVLGNLLRSIRDKATSGDSRLKYATGNVTGPNFQEIYGLMQCTPDLSDLKCDECLGGAISDLPVCCNNKVGGRVIRPSCNIRYETYRFYQATAEAPSPSSPSTPPPPPSTNNTSSGGGKSNTSLIAIAIAVPVAVVVLVLSIICIYLRMKKPREISKIPSEDDDEEIKTNESLQFNFDTIRLATNDFSDSNKLGEGGFGAVYRGRLSNGQMIAVKRLSMNSNQGDVEFKNEVLLVAKLQHRNLVRLLGFSLEGRERLLVYEFVPNKSLDYFIFDPIKKAQLDWEKRYKIIGGIARGLLYLHEDSQLRIIHRDLKASNILLDEVMNPKISDFGMARLIVVDQTQVNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSGIRHGESVEDLLSFAWRNWREGTATNIIDPSLNNCPRNEMIRCIHIGLLCVQENLANRPTMATIALMLNSYSLTLPVPSDPAFFVDSRTRSLPDMPLWEDNSGATRSSESTTKSIRESVNEASITELYPR. 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01645 674 Gene3D - 28 129 IPR038408 -
Seca7g01645 674 Gene3D - 136 243 IPR038408 -
Seca7g01645 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 672 - -
Seca7g01645 674 ProSiteProfiles Protein kinase domain profile. 342 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01645 674 MobiDBLite consensus disorder prediction 248 272 - -
Seca7g01645 674 SUPERFAMILY Protein kinase-like (PK-like) 327 639 IPR011009 -
Seca7g01645 674 FunFam Cysteine-rich receptor-like protein kinase 10 139 243 - -
Seca7g01645 674 CDD STKc_IRAK 348 613 - -
Seca7g01645 674 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Seca7g01645 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 130 - -
Seca7g01645 674 Gene3D Phosphorylase Kinase; domain 1 307 417 - -
Seca7g01645 674 MobiDBLite consensus disorder prediction 645 665 - -
Seca7g01645 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Seca7g01645 674 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Seca7g01645 674 Pfam Protein tyrosine and serine/threonine kinase 345 609 IPR001245 GO:0004672|GO:0006468
Seca7g01645 674 FunFam Cysteine-rich receptor-like protein kinase 17 312 417 - -
Seca7g01645 674 SMART serkin_6 342 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g01645 674 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Seca7g01645 674 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Seca7g01645 674 Pfam Salt stress response/antifungal 32 127 IPR002902 -
Seca7g01645 674 Pfam Salt stress response/antifungal 146 241 IPR002902 -
Seca7g01645 674 FunFam cysteine-rich receptor-like protein kinase 10 418 619 - -
Seca7g01645 674 MobiDBLite consensus disorder prediction 639 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01645 Seca-Chr7 31357699 31362234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01645 5 674 Receptor kinase-like Gene Family AT4G21410 49.493 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g01645 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01645 - - tpra:123920197 902.123