Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01642 ATGGAAACTTTGGATGGTAATTCAGACCAATACGCCACCGTTTCTTCTAATTCAACATCTTCTTCTGGAGGTGTTAATAGTAATGATAACAATGATAATAGTAATGGAAGTGTAACCTGGTATGGGATGAGGTTGCCTTCTGTTAGCCCTTTACGTTCCCCACTTTCCTTTCTATTGGATTACTCTGGCATTCTTCGTTCAACCCATGATTCTGAGGATGTGATTGTTAACAATGGAGTTCCTGCTTCGGAATTACGGTCTCAGCTTCAAATGCAATCGTTTGATGATGCTCCTAATGCTGCTGCTGGGACCAGTGCAGGGGAAGTTGCAATAAGGATAATTGGAGCTGGAGAGCATGATCAGAACCATCTTGGAGAAATGGGGTATAATGATTGTGATGATCTGATTGGTGAGAGAGGTAGAATGCCTGCATTGGATGATGGTGCTGAGGGTCATGGTGGAATTGCGGCCAGTGAGAGGGTTCCTCTGGTGTCTTCAGCTTCGTCGTCGTCATTGGCTGGTAGTGGACAGGTTGATGGGGATGCTGCTGGGAATGGCACAGAAAGTAACAGCAGGGATTCCTCATCCTACCAGAGGTATGATATCCAGCAGGTTGCAAAGTGGATTGAGCAGATTCTTCCTTTCTCACTCTTGCTGTTGGTTGTGTTCATCCGACAGCATTTACAAGGTTTCTTTGTCACAATTTGGATATCAGCTGTGATGTTCAAGTCGAATGAAATTGTTAAGAAGCAGACAGCTTTAAAGGGAGACAGGAAAGTCTCTGTTCTTATTGGTATCTCTTTTGCTTTCATTCTTCACGTGATGTGCATTTACTGGTGGTATCAAAATGATGACCTTTTATACCCATTGGTCATGTTTCCTCCAAGACCAACTCCCTTCTGGCATGCAGTATTCATCATCTTGGTCAATGATATATTGGTGCGGCAAGCTGCAATGGCTTTCAAGTGTTTCCTTCTTATATATTACAAAAATGGCAAAGGTCACAACTTCCGTCGGCAGGCTCAAATGTTAACTCTGGTTGAATACACACTGCTGTTGTATCGTGCCTTGTTGCCAGCACCAGTTTGGTACCGGTTTTTCTTGAATAGGGAATTTGGCAGTCTCTTTTCATCACTGACAACAGGGTTGTATTTAACTTTCAAGCTAACATCTGCTGTTGAGAAGGTATGTTTTCACTCTTTAAAATTAGTGTGCATGTTCTGTATTCAAAGATACTTGTTTATGGTCCAATGCTTCATTTCTGCCTTAAAAGCCTTATCAAGAAAGGAAATTAATTATGGAGTTTATGCCACAATGGAACAGGTGATGTTCCAGTTAAATATTTTTATCGACACTGAATTTTATCTTAACAATTACATTGTGCATAACAATTGTTTCTCCTTTGTCAAAAATTTCTGA 1419 0.4116 METLDGNSDQYATVSSNSTSSSGGVNSNDNNDNSNGSVTWYGMRLPSVSPLRSPLSFLLDYSGILRSTHDSEDVIVNNGVPASELRSQLQMQSFDDAPNAAAGTSAGEVAIRIIGAGEHDQNHLGEMGYNDCDDLIGERGRMPALDDGAEGHGGIAASERVPLVSSASSSSLAGSGQVDGDAAGNGTESNSRDSSSYQRYDIQQVAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWISAVMFKSNEIVKKQTALKGDRKVSVLIGISFAFILHVMCIYWWYQNDDLLYPLVMFPPRPTPFWHAVFIILVNDILVRQAAMAFKCFLLIYYKNGKGHNFRRQAQMLTLVEYTLLLYRALLPAPVWYRFFLNREFGSLFSSLTTGLYLTFKLTSAVEKVCFHSLKLVCMFCIQRYLFMVQCFISALKALSRKEINYGVYATMEQVMFQLNIFIDTEFYLNNYIVHNNCFSFVKNF. 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01642 472 MobiDBLite consensus disorder prediction 1 33 - -
Seca7g01642 472 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 17 403 IPR044235 GO:0061630|GO:1904294
Seca7g01642 472 MobiDBLite consensus disorder prediction 168 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01642 Seca-Chr7 31301124 31305353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01642 51 442 C3H Transcription Factor Family AT5G01960 53.483 7.44e-136 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01642 - K22379 gmx:100784614 457.603