Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01638 ATGAAGAGAATCGGTGAATTGTCTGCTAATGATATAAGAGGTATTGAATTTGATGATGAGGCTGCAACTTGTAGTTTTTATGAAAGTTATGCAAAATGTAATGGGTTTGTTGTTAGAAAGGCTGAGGTAGACCGTGATTTTAAGGGAAAGATTGTTATGAGACAACTTGTGTGTAACAGAGAAGGTCAAAGGAAGAAGAAACATTTGATGCGTGTGGACAGAGTGAGGCAACCCATGGCTTTGACTCGAACTGGGTGTCCTGCAAGGCTAAGAGTACATTATAATTTCAAGACTAGTAAGTGGAGAATTGTTGTATTTGAGGAAAATCACAATCATGAGTTAACTCCTCCTCAATTTGTTCATTTCACACCTGCTTATAGAGGTTTGACTGAAATTGATAAAGTGCATGTTAATAACTTACACACACATGGTGTGAGAACTTGCCATATTTTGGGTTTATTGTTAAGCCAGAAGGGTGGTCATTCAAAGTTTGGTTTCTGTAAGAAGGATCTATATAATCACATTGATAAGAAGAAGAGAGCGGCTATAGAAGATGGTGATGCTTTTGCTACATTATGTTATTTGCAGGCTAAGTTTGTTAACGATCCAATATCATACACGATATTTACCACTATAGATTATGGATGTTTACGGAACCTGTTTTGGGCTGATGGAGCAAGTCGTGTAGATTATGAATGTTTTGGTGACGTAGTTGCTTTTGACACAACTTACAAAAAGAATAAGTATAATAAGCCTCTTGTTTTTTTTTGTTATAACCACCATGGTGAGTGA 792 0.3649 MKRIGELSANDIRGIEFDDEAATCSFYESYAKCNGFVVRKAEVDRDFKGKIVMRQLVCNREGQRKKKHLMRVDRVRQPMALTRTGCPARLRVHYNFKTSKWRIVVFEENHNHELTPPQFVHFTPAYRGLTEIDKVHVNNLHTHGVRTCHILGLLLSQKGGHSKFGFCKKDLYNHIDKKKRAAIEDGDAFATLCYLQAKFVNDPISYTIFTTIDYGCLRNLFWADGASRVDYECFGDVVAFDTTYKKNKYNKPLVFFCYNHHGE. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01638 263 PANTHER OS01G0519700 PROTEIN 12 257 - -
Seca7g01638 263 Pfam FAR1 DNA-binding domain 25 115 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01638 Seca-Chr7 31052378 31053169 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g01638 FAR1 3.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01638 - - ccaj:109792835 321.242