Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01631 ATGGGGATAAACAGCTTTCTATGGAATTTTACTAAAAAGTTCATCACATTTGGGCTCATTACTGTGACTGTGTCCGATCGTTATGTGACTATTGTTCCAGTTAGAGGTGGCTCTATGTCTCCTACATTCAATCCTAAAGCCAATTCTTTGACAGGAGATTTTTCTGATGACTATGTCTTGGTTGAGAAATTTTGCCTTCAGAAGTACAAGTTTTCACATGGTGATGTGGTGGTCTTCCGCTCCCCATTGAATCACAAGGAGACACATGTAAAGAGAATAATTGCATTACCTGGTGAATGGTTTGGCACTCGTCATAACTATGATGTGCTGAAGATTCCGGAAGGACATTGTTGGGTTGAGGGAGACAATGCAGCTTCTAGCTTGGATTCAAAATCATTTGGACCTATTCCTTTGGGTCTAGTTCGAGGAAGGGTTACCCATATTGTATGGCCTCCTCATAGAATAGGAGCTGTCAAGAGTACTTCACCAGAAGGATTATCTTCTCTATAG 510 0.4118 MGINSFLWNFTKKFITFGLITVTVSDRYVTIVPVRGGSMSPTFNPKANSLTGDFSDDYVLVEKFCLQKYKFSHGDVVVFRSPLNHKETHVKRIIALPGEWFGTRHNYDVLKIPEGHCWVEGDNAASSLDSKSFGPIPLGLVRGRVTHIVWPPHRIGAVKSTSPEGLSSL. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01631 169 Pfam Signal peptidase, peptidase S26 109 150 IPR019533 GO:0004252|GO:0006465
Seca7g01631 169 Pfam Signal peptidase, peptidase S26 9 99 IPR019533 GO:0004252|GO:0006465
Seca7g01631 169 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Seca7g01631 169 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
Seca7g01631 169 Gene3D Umud Fragment, subunit A 26 161 - -
Seca7g01631 169 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Seca7g01631 169 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 164 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Seca7g01631 169 NCBIfam signal peptidase I 19 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Seca7g01631 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Seca7g01631 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Seca7g01631 169 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01631 Seca-Chr7 30955970 30961528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01631 39 161 MADS-box Gene Family AT1G29960 34.884 5.95e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01631 K09648 - gmx:100527429 291.967