Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01611 ATGAGTGAGACAAAGAGAGAAATGGAGGCAAAGAGTGTGAATTCTATGAAGGAATGGTTCAAGTCATCACAGGCTCTGTTAAGCATGTTGCTGGTGCAAATTTTCACAACAGGGATGCAACTTCTTTCAAGGGTCATTTTGGTTAAGGGCACTTTCATTTTTTCACTCCTTGCATATCGTCATATAGTTGCTGCTATTTGTGTTTTACCCTTTGCACTTTATTTTGAAAGGGACCGTCCAAAGAAGTTCAATTGGAGAGTTTGGTTTTGGCTCTTTGTTAATGCATTAGTGGGGATGACGTGTGCAGTAGGACTGTTCTATTATGGACTGAGAGACACTTCAGCCACTTACTCTGTCAATTTTCTCAACTTAGTTCCAATTTGCACCTTCTTTACCTCTATCATATGCAGAATGGAGAATCTGAAGCTGCAAACATTGGCTGGTAAAGCAAAGACAGTGGGGGCAATTTTATGTGTTGGAGGAGCATTAGTTACCAGTCTTTACAAAGGGAAGGAATTCTACCTTGGTCATCGTGAACACCAAACTAAAACTTCTAATGTGCCACACGAAACCAACATGCTACGTGGCACTATCTTCTTGATTCTCAGCTGCTGCTCTTACACAGCTTGGTTTATTGTGCAAGTCAAATTGCTTAACGTATTTCCTTTGAGATATTGGTCAACAATGATAGCATGCATTATGGCTGCAATTCAGTCATCAATAATAGGCGTGTGCTTAGATTCCAGTAAGGCTGCTTGGACATTACGGTGGAATCTACAACTTGTAACTATAGTGTACTCGGGAGCATTGGCTACAGCTGCTACATTTACCTTGATATCTTGGGCAATTGCAATCAAAGGACCAACTTATCCCCCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCCATATCAGAAGCTATCATACTTGGGGAACCACTAAGTGTTGGATTGTTGGTGGGGATGGTTTTGATCATATCAGGATTGTACTCCTTTTTGTGGGGCAAAACAAATGAGAAACCACGCTTGCCTCAAACAAATGTAGCAGCTGCAGAAATGTCAACAAGCATGGCTGATGACCCTGCTATGATGCAACAATCAACAGCAGTTGTAGTACCAAGTCCTTCATCTCATGAAAGTGTAGTTCTTGAAATTGAAAAGACTGGCAAAAACTGA 1176 0.4107 MSETKREMEAKSVNSMKEWFKSSQALLSMLLVQIFTTGMQLLSRVILVKGTFIFSLLAYRHIVAAICVLPFALYFERDRPKKFNWRVWFWLFVNALVGMTCAVGLFYYGLRDTSATYSVNFLNLVPICTFFTSIICRMENLKLQTLAGKAKTVGAILCVGGALVTSLYKGKEFYLGHREHQTKTSNVPHETNMLRGTIFLILSCCSYTAWFIVQVKLLNVFPLRYWSTMIACIMAAIQSSIIGVCLDSSKAAWTLRWNLQLVTIVYSGALATAATFTLISWAIAIKGPTYPPMFNPLALIFVAISEAIILGEPLSVGLLVGMVLIISGLYSFLWGKTNEKPRLPQTNVAAAEMSTSMADDPAMMQQSTAVVVPSPSSHESVVLEIEKTGKN. 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01611 391 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020
Seca7g01611 391 Pfam EamA-like transporter family 26 157 IPR000620 GO:0016020
Seca7g01611 391 PANTHER WAT1-RELATED PROTEIN 26 350 IPR030184 GO:0016020|GO:0022857
Seca7g01611 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 336 - -
Seca7g01611 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01611 Seca-Chr7 30516633 30526598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01611 26 336 Nodulin-like Gene Family AT1G09380 34.591 1.55e-60 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01611 - - gmx:100782551 535.028