Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01609 ATGAATGAGTCATCAATTCCAATAGCCAAAGGTGTAGAGAAATGGGTCAAAAATATTCATGAAAATATTGTTCAAAGTGACCAAGAGAGTGTTGTTGACTATACACCATACTTGGAAATGGAGTTTGAATCTGAGGTAGCGGCCTATGAATTTTATAATGAGTACAGTAAAAGAATTGGGTTTGGTATTCGTCGAGAATATGGAAACAAAAGCAAAAAAGATGGAATTCTAACTTCAAGAAGGTTCTCATGCTTCAAAGAGGGTAAACGGAGCGTTGACAAACGAGACCACTTGACAAAAGAGCCTAGAGCAGAAACTAGAACAGGATGTGAAGCGCGTATGGTTATTTCACTTGATCGGAAGATCGGGAAATACAAGGTTATTGACTTTGTAGCTCAACATAATCATCCTCTTCAACCGTCAGAATGTGTTCATATGATTCGCTCTCATCGAAACATATCTGAGTCACAAGCATCACACATTGTATTGGCAGATGAATCTGGATTGAAACCAAAAGATTTTCATGAATATGTGTCCAAGCAAGTTGGTGGAATAAACAGTGTTGGCTATACAAGAACTAGAAGAAAATTGTCTTTAAGGTATGGTGAAGTGGGTGCATTATTGATGTACTTCAAACAACAAAGTGAAAACCCTTCATTCTTTTATGAATTTCAAATGGATGTTGAAGAGAAAATAACAAATATATTTTGGGCAGATGCACAGATGATAAATGATTATGGGTACTTTGGTGATATCATCACTTTTGATACCACTTACAAGACAAATAAGGATTATCGACCTCTGGGAGTATTTCTTGGGCTTAATAATCACAGGCAAACAATTGTTTTTGGGGCAACATTGCTATATGATGAAACAATACCTTCTTTTCAATGGTTATTTGAAACTTTTTTGAAAGCAATGGGTGGAGAAAAGCCTAAAACCATTCTAACAGATCAAGATGCAGCAATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTATGTACTTGGCATATAAGAGAAAATGCCCTTAGGCATGTGAACCATCTATATCAAAAGAGTTCACAATTCTGCTCAGATTTTGAAGCATGCATTGATCTACATGAGGAAGAAGGTGAATTCCTGACTGCATGGAATGATTTACTTGTTGACCATAGTGTTTCCGATGATTCGTGGCTACATACAATTTTTCGAGTGAAGGAAAAATGGGCATGGGCTTATGTCCGAAAAACTTTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGCTTTAATGCTGATTTGAAAAATCATTTGAAGTCAGATTTAAATTTGGTACAATTTTTCACACACATGGAAAGAGTTGTCAATGGAAAACGATACAATGAGTCAGAAGCTGATTATGAGTCAAGACATAAGCTGCCTAGATTGAAAATGAAGAAGGCCCCTATGCTTGTACAAGCTGGAAATATTTACACTCCAAAAATATTTGAGGAATTCCAAGAGGAATATGAGGAATATCAAGGCACTTGCATAAAAGAAATGAAAGAAGGGTTGTACATTGTTACAAATTATGATAACAGTAAGGAGCGAATAGTATTGGGAAATGTTGTGGATCAAAAGGTTGCTTGTGATTGTCGTAAATTTGAGACTCATGGTATCTTATGCAGTCATGCTTTGAAAGTTTTGGATGTGATGAATATCAAGTTAATTCCTCAACATTATATACTAAAGCGATGGACAAGAGATGCAAGGTCAGGAAGAAATCGAGATTGGAAAGGAAAACATGTTGAATTGGACATAAAAGCCCATTTCATGAAGAGATGCAATGAGTTATGTCCTTGA 1839 0.3605 MNESSIPIAKGVEKWVKNIHENIVQSDQESVVDYTPYLEMEFESEVAAYEFYNEYSKRIGFGIRREYGNKSKKDGILTSRRFSCFKEGKRSVDKRDHLTKEPRAETRTGCEARMVISLDRKIGKYKVIDFVAQHNHPLQPSECVHMIRSHRNISESQASHIVLADESGLKPKDFHEYVSKQVGGINSVGYTRTRRKLSLRYGEVGALLMYFKQQSENPSFFYEFQMDVEEKITNIFWADAQMINDYGYFGDIITFDTTYKTNKDYRPLGVFLGLNNHRQTIVFGATLLYDETIPSFQWLFETFLKAMGGEKPKTILTDQDAAMAKAISLVMPETFHGLCTWHIRENALRHVNHLYQKSSQFCSDFEACIDLHEEEGEFLTAWNDLLVDHSVSDDSWLHTIFRVKEKWAWAYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVQFFTHMERVVNGKRYNESEADYESRHKLPRLKMKKAPMLVQAGNIYTPKIFEEFQEEYEEYQGTCIKEMKEGLYIVTNYDNSKERIVLGNVVDQKVACDCRKFETHGILCSHALKVLDVMNIKLIPQHYILKRWTRDARSGRNRDWKGKHVELDIKAHFMKRCNELCP. 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01609 612 ProSiteProfiles Zinc finger SWIM-type profile. 518 565 IPR007527 GO:0008270
Seca7g01609 612 Pfam MULE transposase domain 252 346 IPR018289 -
Seca7g01609 612 Pfam FAR1 DNA-binding domain 50 140 IPR004330 -
Seca7g01609 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 611 IPR031052 GO:0006355
Seca7g01609 612 Pfam SWIM zinc finger 526 562 IPR007527 GO:0008270
Seca7g01609 612 SMART 26again6 540 567 IPR006564 GO:0008270
Seca7g01609 612 ProSiteProfiles WRKY domain profile. 65 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01609 Seca-Chr7 30248014 30249985 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g01609 MULE 1.8e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01609 - - tpra:123895462 1005.74