Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01602 ATGGGTGCCGTCGATTGTTGTGCGCCGCCGCGTAGGGAGGAGATAGCGGTGCTGTCTCTCAACACTTTACCTTTGGGTTTCCGATTCCGTCCAACCGATGAGGAGCTCATCGATTACTACCTGCGCTTAAAGATCAATGGAAATGGAGATGATGTTTGGGTTATCCGTGAAATCGATGTCTGTAAATGGGAACCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAATGGTTCTTCTTCTGTCCGCAGGACCGCAAGTACCCAAATGGGCACAGGTTGAACCGAGCAACGAGTCATGGGTATTGGAAGGCAACAGGCAAGGATCGCAAGATTAAGTCTGGTAACACCTTGATTGGAATGAAGAAGACTCTAGTTTTCTACACTGGTCGTGCTCCCAAGGGGAAGAGAACCAATTGGGTTATGCATGAGTACAGGCCTACATTGAAGGAGCTTGATGGTACCAACCCTGGACAGAATCCGTATGTCCTTTGTCGCTTATTCAAAAAAAATGATGAGACTCTTGAAGGTTCAAATTGTGATGAAGTGGACCAGACTACTTCAACTCCTACTACTGCCAATTACTCTCCAGAAGAAATACTATCCGATCCAACTCTGGTTCCTGTATCTTCCTCCCAAGCTACAGAAGATGATAAGCAATTAGCAGTTATCAATGAGAACTCTGAGGAAGCAATATCTAACATTATAACTCCAGCTGATTGCCATAGTGATGGATGTGATGCTCATGATGCCAGAAATCAAATTTTAGAACCAGCTGTAGAGGAGGATCAGCCATTGAACTTGGACATATTTTATGACCTAACAAATGAGCCATTGGATGACAAATTATTCTCTCCAGTCCATGCGCATTTTCCATCAGGATTTTATTATGAACCTAACAATGAATTAGAACTTCAGTATGGTACCAATGAGACAAATATTTCAGACTTTATTAGCTCAGTTGTTAATTGGGATGAGTTCTCCCATGAGGAATCTAGCAGTCTAGAGCTGAACTCAGCATTGATTAATGTTAAGGACAATGGATCATGCAGTGACTCAGATGTGGACATGGCCAATATGACGTCTTCTTGTATGCTGCAGCATCTGCAACCATTACAGGCTGCTTATCCTAAGGAAGCAATTGAGCAAACGAGCAATGTGGGATTATTTCAGAACAATTCCCAAATGGCTTTCTCAACCGATGTTAGTATGGGTCAAATGTCCAGTATGGTCAATGATTATGAGCAATCAAGAAACTTTGATATGGCTGTTCATGGTGATACTGGAATCAGGATAAGGAGTCGACAAGGACGAATTGAGCAGCCAAACACGAACCCAATGATACAAGCGCAAGGTATTGCACCAAGGAGAATCCGATTGGGAGGATTTGTTACACGTCAGCGTGGTTCCAATGAGACAGAAAAGGATGGAAGTTGTGCACCAGAAGACCATAATTCAAAAACCACCATTGCTGGGGAGAGGAAAGCTTCAGAAAACCAAGCTGCTGCTGAGAGTGCCACGGTTACTAATGACACGGATGAACCGGAGAAGACATCTCCTGAGTCAGCTGAAGATGTTGCAACTGCGGAATCCATGTTGGAGTCAAAAGACCTTCTATTGGGCAAAAGGGTCCGTTACACGACAAAGGTTTCCTCCAATCGCGCCATGTGGTCTACTGTTTTTGCAGTTTCTGCCATTGTACTGGCCTCACTAGTATTGCTTGTCAATATATGGGGATATCTTAGATCTAAAACTGCTTACTAG 1773 0.4382 MGAVDCCAPPRREEIAVLSLNTLPLGFRFRPTDEELIDYYLRLKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATSHGYWKATGKDRKIKSGNTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDETLEGSNCDEVDQTTSTPTTANYSPEEILSDPTLVPVSSSQATEDDKQLAVINENSEEAISNIITPADCHSDGCDAHDARNQILEPAVEEDQPLNLDIFYDLTNEPLDDKLFSPVHAHFPSGFYYEPNNELELQYGTNETNISDFISSVVNWDEFSHEESSSLELNSALINVKDNGSCSDSDVDMANMTSSCMLQHLQPLQAAYPKEAIEQTSNVGLFQNNSQMAFSTDVSMGQMSSMVNDYEQSRNFDMAVHGDTGIRIRSRQGRIEQPNTNPMIQAQGIAPRRIRLGGFVTRQRGSNETEKDGSCAPEDHNSKTTIAGERKASENQAAAESATVTNDTDEPEKTSPESAEDVATAESMLESKDLLLGKRVRYTTKVSSNRAMWSTVFAVSAIVLASLVLLVNIWGYLRSKTAY. 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01602 590 SUPERFAMILY NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
Seca7g01602 590 MobiDBLite consensus disorder prediction 495 512 - -
Seca7g01602 590 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Seca7g01602 590 MobiDBLite consensus disorder prediction 179 201 - -
Seca7g01602 590 MobiDBLite consensus disorder prediction 472 494 - -
Seca7g01602 590 MobiDBLite consensus disorder prediction 183 201 - -
Seca7g01602 590 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Seca7g01602 590 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 270 - -
Seca7g01602 590 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Seca7g01602 590 MobiDBLite consensus disorder prediction 467 532 - -
Seca7g01602 590 FunFam Nac domain-containing protein 86 32 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01602 Seca-Chr7 29993462 29997141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01602 15 463 NAC Transcription Factor Family AT4G35580 45.283 1.16e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g01602 NAM 9.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01602 - - gmx:100778903 834.713