Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01600 ATGCTTTGCTCTGCTCCTGTAAGTGGTCCTTCAGAATCAGTCTCTTCTGGTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTAATAGGACTGGACCCCACAAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATATCCCGTGCAGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAAGGGTGCATTTCATAGCTTAAAGCATGATGTATTGCCATATCTTGTTCGGAGCCAACTGAGATCAGAAGTATTATTAAATGGTATACCACAAGCAGAAGAAAATGGAACTGAGAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTCGCTAATGCATCTGAACCGACCTTTCATCTACAACATGCACTGTGCCCTAACGGCTCTACTTCTGTTCGAAGAACCCATAAATGCTGTGTTTATATTGCTGGAAGCAGCAAGTACTGTGCTCGCCTAAATTCTATACAAGCATATAGTGACATAAACCGAGATGTGATAGGAGAAGCTAATCATTTGTCTGGGTATTCCTTCTCTGCTCACAACAACATTATCCATCCTTCTGCAGAGCTGGGGGCAAAAACAACGGTAGGACCACATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCAGTGTGAAACGCTCTGTCATTGGTCGTCACTGTAGGATAGGTGCCAGTGTTAAGGTTGTTAATTCGGTAGTTATGAATCATGTTACTATTGGAGACTCTTGTTCAATTCAAGGTTCTGTCATCTGCAGCAATGTACAGCTCCAAGAACGTGCTGTACTAAAAGATTGTCAAGTTGGAGCAGGTTTTGTGGTCACTGCTGGTAGTGAATGCAAAGGGGAGGTCTTGGCTAAGAAATGA 975 0.4215 MLCSAPVSGPSESVSSGGKDKTKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSISRAVGQIEIRADLMDAHLYAFKRSVLLEVLDQKGAFHSLKHDVLPYLVRSQLRSEVLLNGIPQAEENGTEKVISQSNQQMLSQILANASEPTFHLQHALCPNGSTSVRRTHKCCVYIAGSSKYCARLNSIQAYSDINRDVIGEANHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGASVKVVNSVVMNHVTIGDSCSIQGSVICSNVQLQERAVLKDCQVGAGFVVTAGSECKGEVLAKK. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01600 324 MobiDBLite consensus disorder prediction 1 26 - -
Seca7g01600 324 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 213 IPR029044 -
Seca7g01600 324 CDD LbH_eIF2B_gamma_C 235 315 - -
Seca7g01600 324 Gene3D Hexapeptide repeat proteins 214 321 - -
Seca7g01600 324 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 324 - -
Seca7g01600 324 SUPERFAMILY Trimeric LpxA-like enzymes 177 310 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01600 Seca-Chr7 29975639 29980738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01600 179 315 Eukaryotic Initiation Factors Gene Family AT4G18300 29.870 5.47e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01600 K03241 - gmx:100799460 582.793