Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01582 ATGAATGTGCAGTTATACTGTCCCGGTAAAAAAGCTCCTGGACTATATGAATATGATGATCTGTATGATGATGATTTCAACATAGATGAAGTGGATCTTGAACTTGAGAACTATGAGGAACTTTTTGGTATGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTAATAGCTTATTTGAGACAAAGGACATGTCTGTTAGTGCTGGTGATTCCAATTGTCAGGGTGCTGTTGCTGCTGAGGGGTCATCAGCTGGGTTGGTTAATGCTATGCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAATGTTAAGTACTAAAACCGAACCAGTTCTTTGTTTTACCGGAAGGCAATCCCAATCAAACATTTCCTTTTCTGGTGCTGCCAAAGATAGTAGTGCTGGTGACTATCAAGACTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGTCCTGAGAGTTCTATGCAATCTGCTAATCGCAGCAATGCTGTCATGCGTTATAAGGAAAAGAAAAAGACCCGGAAGTTCGACAAGAGAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGACGTGTGAAGGGCCGGTTTGTCAAAGCTGGCGATGTCTATGATTACGACCCTTTGAGCCAAACAAGAAGCTACTGA 684 0.4371 MNVQLYCPGKKAPGLYEYDDLYDDDFNIDEVDLELENYEELFGMALSHSEELFENGGINSLFETKDMSVSAGDSNCQGAVAAEGSSAGLVNAMQPACSNAASADSMLSTKTEPVLCFTGRQSQSNISFSGAAKDSSAGDYQDCDASSMLLMGEPPWCPPCPESSMQSANRSNAVMRYKEKKKTRKFDKRVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSQTRSY. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01582 227 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 21 214 - -
Seca7g01582 227 ProSiteProfiles CCT domain profile. 170 212 IPR010402 GO:0005515
Seca7g01582 227 Pfam CCT motif 170 212 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01582 Seca-Chr7 29542542 29547211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01582 19 227 C2C2-CO-like Transcription Factor Family AT3G07650 57.277 2.16e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g01582 CCT 1.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01582 - - gmx:100787695 364.385