Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01560 ATGGAACCCGTCCTCCTCCAAATTTTGAGATGGCTGATGCAGCCAAAGGTATATAGAATTGTGTGTTTCGTTTCATCTCTTGTTGGACTGATTTGTTACGCTCTCAGCTCCTCCTTCAACCATTTATTCGGAAAATGGACATTGTTGAAGATAATTCTTTATAGTATATTTAGTTTCATCATCTGCCTCGCCATCCTGTTTGCAAAGGCATGGCAACACTCACCTAGTCTCCAACTCAAAGCTCATTTGGCATTTTTGGTTTTGATCATCACCACTGCATACTCATTTTTTTTCGATAAAGTAGTAACCGGGAAACCAGATGCATATAGCTTGATTTCATGTGCAGCTTTTGCTATCATGTCGGTTAGCTTGTCAAGACAGACTCACTGTGGGATCGAGATTGATCTCCTTTATTTCTTCTGCACATGTTTAATAGGGCAACTCATGAAGATAAAATTATTGTTAGTGTTTGTTGGAGCGGGTTTCAGTTATCCCCTCATCATTGTCCGTTCCTATTTGAATTCTCCAACAGAAAGTAGTTACCATGGGCATGCCCATGGGCTTGGAGCCCAAGCCCAAGATCAACAGAGCGTAGTGATCCGAGTCCATTTAGATCCAGAAGAAACCAATACTGGTAGTGCTCCTACCTTGACTTTTGCTGAAACTGGGGAACTTGGAGGACAAGATCAATTGGTAGTGACTTTCAATCAAGTGGATTCTCATTCACAACAAGGCAATATCGATAGGGATCTTATCCTGCCACAGCTTATGACTTGTATAAAGGATCTTAGTAAGGAGAATCGAAAGCTCATCCGCATGGTTTCCAAACTTATTGACTCAGCAGATAAGGACCAGACTCCAGAGTCTGACCACAACTTGGTGATTGATGCGTTGCCGGCGGGAATTATCAACGAGCTTCACGAAGCGGTGAAGCTTATGGTGGGAGCTGGGTTTGAGGAGGAATGTTGCGATGTTTATAGTAATTGCCGGAGGGAATTTGTGGAAGAGTGCCTGTCGAGATTTGGATTGAGAGAGCTCAACATTGAAGAGACAGAGGAGATTGAGAGATGGATTAGTGCTTCTAATTTGGCACTGAGGGTACTGTTTCCCAATGAAAAGAAACTCTGCGATCGCATATTCTTTGGTTTCTCTGCCTCCGCAGGTGTTTCTTTCATGCAAGTTTGTAGGGAATTGACTGTTGGTCTTCTGAATTTTGCCAATACCTGCTTTGCAACTGGGAAACGTTCGCCGAGTCTTCTGCGCGGCATCCAGACTTTAAGTGACTTGATTCCAGAGTTTGAATCATTGTTTTCTGATCCGTACAGTGTATCATTACGAAATGACGCGCTTAGTGTTCAGAAAACGTTGGCCATTTCCATGGAGTTTGATAATCTTGTTTACCGTCCTAGAATAATGTTTTGA 1422 0.4269 MEPVLLQILRWLMQPKVYRIVCFVSSLVGLICYALSSSFNHLFGKWTLLKIILYSIFSFIICLAILFAKAWQHSPSLQLKAHLAFLVLIITTAYSFFFDKVVTGKPDAYSLISCAAFAIMSVSLSRQTHCGIEIDLLYFFCTCLIGQLMKIKLLLVFVGAGFSYPLIIVRSYLNSPTESSYHGHAHGLGAQAQDQQSVVIRVHLDPEETNTGSAPTLTFAETGELGGQDQLVVTFNQVDSHSQQGNIDRDLILPQLMTCIKDLSKENRKLIRMVSKLIDSADKDQTPESDHNLVIDALPAGIINELHEAVKLMVGAGFEEECCDVYSNCRREFVEECLSRFGLRELNIEETEEIERWISASNLALRVLFPNEKKLCDRIFFGFSASAGVSFMQVCRELTVGLLNFANTCFATGKRSPSLLRGIQTLSDLIPEFESLFSDPYSVSLRNDALSVQKTLAISMEFDNLVYRPRIMF. 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01560 473 PANTHER EXOCYST COMPLEX PROTEIN EXO70 256 459 IPR004140 GO:0000145|GO:0006887
Seca7g01560 473 Pfam Exo70 exocyst complex subunit 355 457 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g01560 473 SUPERFAMILY Cullin repeat-like 258 457 IPR016159 -
Seca7g01560 473 Gene3D Exocyst complex component Exo70 232 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01560 Seca-Chr7 29043341 29044762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01560 287 468 EXO70 exocyst subunit family AT5G58430 51.500 3.12e-60 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01560 - - aprc:113848415 493.041