Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01540 ATGAAGTGGGAAATGGAAATTCTCTCTCCTGCACCTTTTACACCCAACTCCAATTGGTGTGTGGAAGATAATAACAGGAGCACAAAATGGACTCCACAAGAGAACAAGCTCTTTGAAAATGCTCTTGCAGTGCATGATAAGGATACCCCAGATCGGTGGCACAAAGTGGCTGAAATGATTCCAGGGAAAACAGTTGGAGATGTGATCAGACAATACAAGGAATTAGAAGTAGATGTTAGCAATATAGAAGCTGGTTTGATCCCAGTTCCTGGATATACTACTCCAACATCACCCTTCACCTTAGATTGGGTGAACACACCTGGTCCTGGTTACTATGATGGGTTTAAAGGAAGTGGAAAAAGATCTTCCTCAGTTAAACCTCCTGAGCAGGAAAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACATAAATTGTTTCTACTTGGTCTGAAGAAGTATGGCAAAGGTGATTGGAGAAATATTTCCCGCAATTTTGTCATTACTAGAACCCCAACTCAGGTGGCTAGCCATGCTCAAAAGTACTTCATAAGGCAACTTTCAGGTGGCAAAGACAAAAGGAGGGCCAGTATTCATGACATAACAACAGTTAATCTCACAGAAACCACCAGAACTTCTTCTTCAGAAGATACCAATAGATCCACTTCACCACAGCATTCAATGATGCTTTCACAGCAGCAGCAAAATTCTACTGCTTCTACATCTAGAGCTCATTTTCAGTGGAATAATCAACCAAATTCAGGAGTATCTATGGCTTTCAATCCTGCACATGAAGAAGTCTTCATGTCACCACATGGTGTTAACTCCTATGGACTTAAAATGCAAGGCCAAAATCTCCAAAAGGGTGCTATTCATGAGTCTTCTTACTTGGGACCTCAGACACAGAACATGGCTTTCCAAATGCAACAGTCTTCCCAACACTATTCTCATGCATAA 954 0.4172 MKWEMEILSPAPFTPNSNWCVEDNNRSTKWTPQENKLFENALAVHDKDTPDRWHKVAEMIPGKTVGDVIRQYKELEVDVSNIEAGLIPVPGYTTPTSPFTLDWVNTPGPGYYDGFKGSGKRSSSVKPPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTRTSSSEDTNRSTSPQHSMMLSQQQQNSTASTSRAHFQWNNQPNSGVSMAFNPAHEEVFMSPHGVNSYGLKMQGQNLQKGAIHESSYLGPQTQNMAFQMQQSSQHYSHA. 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01540 317 CDD SANT 137 182 IPR001005 -
Seca7g01540 317 SMART sant 26 78 IPR001005 -
Seca7g01540 317 SMART sant 134 184 IPR001005 -
Seca7g01540 317 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Seca7g01540 317 SUPERFAMILY Homeodomain-like 131 185 IPR009057 -
Seca7g01540 317 FunFam Transcription factor SRM1 22 89 - -
Seca7g01540 317 CDD SANT 29 75 IPR001005 -
Seca7g01540 317 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Seca7g01540 317 MobiDBLite consensus disorder prediction 204 249 - -
Seca7g01540 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 186 IPR017930 -
Seca7g01540 317 Gene3D - 136 186 - -
Seca7g01540 317 Pfam Myb-like DNA-binding domain 29 73 IPR001005 -
Seca7g01540 317 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Seca7g01540 317 Gene3D - 21 89 - -
Seca7g01540 317 MobiDBLite consensus disorder prediction 116 137 - -
Seca7g01540 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Seca7g01540 317 ProSiteProfiles SANT domain profile. 25 80 IPR017884 -
Seca7g01540 317 SUPERFAMILY Homeodomain-like 28 80 IPR009057 -
Seca7g01540 317 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 258 IPR043363 -
Seca7g01540 317 FunFam transcription factor MYB1R1 136 187 - -
Seca7g01540 317 ProSiteProfiles Myb-like domain profile. 22 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01540 Seca-Chr7 28623597 28626366 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g01540 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01540 - - gmx:778034 490.73