Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01496 ATGACCCTGATTTTTCTGTTGGATCATATCAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTAGAACGTGCTTCTCTCAAACAGGTTCAGGAGCGGTTTGAAGTTCTTAAGAAGCGTAAAGATCTTGGCAGCTTCACAGAGCAAGGTAAGACCTTGGATAAAACGGAAGCGGATTCTCTCCCGTTTACCATAACTGGAGAATCTCATGTTAAAAAAATCTCAACCGTACACTAA 246 0.4146 MTLIFLLDHINGKKHQRALGMSMRVERASLKQVQERFEVLKKRKDLGSFTEQGKTLDKTEADSLPFTITGESHVKKISTVH. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01496 81 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 6 54 IPR040107 GO:0000398|GO:0005681
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01496 Seca-Chr7 27321204 27326274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01496 6 52 C2H2 Transcription Factor Family AT3G05760 87.234 4.95e-24 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01496 K12848 - gmx:100795833 90.5077