Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01495 ATGGCTACTTGGAAGGTTGCTCCTGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAGTTAGCATCTGTGACCTGTTTGGAATTGGGTGAAATATGCAAAGAAGTGGGAGCTAAGCTATGTATTGTGTGTATTTTGTTGTATTGTCTTTTAAGTTTGCTAAGCTACTATGATGTCATGGCCAACATTTTACTTTTCCAACATATTGCCTTTACTGGAAGCTCTGCAACTGGGAGCAAAATCATGACAGCTGCAGCTCAGCTGGTCAAGCCTGTTTCGCTAGAGCTTGGTGGAAAAAGCCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATTGTCCATCTTGCATCTGTGCTCACCTCTATTCTACTTCTACCAATAAAACCTGAAGCAAGTTCCATGTAA 483 0.4348 MATWKVAPALAAGCAAILKPSELASVTCLELGEICKEVGAKLCIVCILLYCLLSLLSYYDVMANILLFQHIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHLASVLTSILLLPIKPEASSM. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01495 160 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 124 135 IPR016160 GO:0016491
Seca7g01495 160 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 99 IPR016162 GO:0016491
Seca7g01495 160 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 146 - -
Seca7g01495 160 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 96 103 IPR029510 GO:0016491
Seca7g01495 160 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 100 140 IPR016163 GO:0016620
Seca7g01495 160 Pfam Aldehyde dehydrogenase family 1 140 IPR015590 GO:0016491
Seca7g01495 160 SUPERFAMILY ALDH-like 1 140 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01495 Seca-Chr7 27318393 27320082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01495 1 140 Aldehyde Dehydrogenase Gene Family AT1G74920 69.655 3.36e-61 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01495 K00130 - gmx:100170731 201.06