Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01494 ATGCAAATCAACAATATCCACTCAGAGTCAGAGGGAACCATGAATGAAGACTTGGAGAACAACAACACAGAGACACCACAGGACATGTCACATTCGATGGTGAAAAAGAAGTCAGATCCAGTTCTGGTCACAAATAGCAACGCTCGTTTTCAAATGCTTAGAAGTTTCATGACCAATTTGCATGTGGTCGTTCTTGCCACTAAGCTTGTGGTGCTTTTTCCGGCAGTCCCATTAGCCGTTGCTGCAAATTTTTATAACTTTGGAAGGCCTTGGATATTTGCTTTCAGCCTGCTTGGACTAGCTCCGTTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTATACTGGCCCAACAGTTGGAGGGCTTTTGAATGCAACATGTGGCAATGCAACGGAGATGATCATATCATTATTAGCACTTCACAAGAACAAAATACATGTTGTCAAGTTCTCCCTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGTAGCTCACTCCTCTGTGGTGGCTTAGCTAATCTTAAAAGAGAGCAAAGATATGACAGAAAACAGGCAGATGTAAATTCACTGCTTTTGTTGCTGGGGTTGCTATGCCATTTACTGCCATTACTGTTCAGATATGCGTTGGCAGGGGGCAATTACTCTGTAGCCACTTCAACTCTTCAATTGTCAAGAGCATGCAGCATTCTTATGCTTCTAGCATATGTTGCTTATATCATCTTCCAATTAAAAACTCATCGCAAATTGTTTGATGCACAAGAGGTGATCATGTGTTGTGTTTTGCCGTTTGATCTCCAGGAAGAAGATGATGAAGATAAGGCAGTGATAGGATTTTGGAGTGCATTTACTTGGTTGGTGGGTATGACACTGGTCATATCTTTGCTTTCTGAATATGTTGTTGGAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTTAGCTTCATTAGCATAATTTTGTTACCAATTGTTGGGAACGCCGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAAAACAAGTTGGATATATCTCTGAGTGTTGCAATGGGATCTGCCACTCAAATTTCAATGTTTGTGGTTCCATTAAGTGTGGTAGTTGCATGGATAATGGGAATTCGAATGGATCTAGACTTCAATCTTCTTGAAACTGGATGTCTTGCTTTTGGAATTATAGTTACAGCGTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGAGTTGTTCTTACTTTATGTTACATTGTCATTTCTGCATGTTTTTTTGTTCTCAAAACTCCACTAACCAACCAATATCCTAAGGTCAATTTTGGAGCTAAAGTATCCTTTGATGACACCTCCACTTGA 1368 0.405 MQINNIHSESEGTMNEDLENNNTETPQDMSHSMVKKKSDPVLVTNSNARFQMLRSFMTNLHVVVLATKLVVLFPAVPLAVAANFYNFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIISLLALHKNKIHVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRYALAGGNYSVATSTLQLSRACSILMLLAYVAYIIFQLKTHRKLFDAQEVIMCCVLPFDLQEEDDEDKAVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLSVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFNLLETGCLAFGIIVTAFTLQDGTSHYMKGVVLTLCYIVISACFFVLKTPLTNQYPKVNFGAKVSFDDTST. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01494 455 MobiDBLite consensus disorder prediction 1 37 - -
Seca7g01494 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 21 432 IPR004713 GO:0006812|GO:0008324|GO:0016020
Seca7g01494 455 Pfam Sodium/calcium exchanger protein 286 426 IPR004837 GO:0016020|GO:0055085
Seca7g01494 455 Pfam Sodium/calcium exchanger protein 91 248 IPR004837 GO:0016020|GO:0055085
Seca7g01494 455 NCBIfam calcium/proton exchanger 55 429 - -
Seca7g01494 455 FunFam Vacuolar cation/proton exchanger 273 430 - -
Seca7g01494 455 MobiDBLite consensus disorder prediction 1 29 - -
Seca7g01494 455 FunFam Vacuolar cation/proton exchanger 120 262 - -
Seca7g01494 455 NCBIfam calcium/proton exchanger 74 429 IPR004798 GO:0006816|GO:0015369
Seca7g01494 455 Gene3D - 120 268 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01494 Seca-Chr7 27311806 27317344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01494 24 434 Antiporters AT2G38170 64.976 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01494 K07300 - gmx:100816844 664.455